Detail information of GWHGAAEX004633/evm.TU.scaffold_151.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10301.00E-85Predicted Ca2+-dependent phospholipid-binding protein
nrgi|514766081|ref|XP_004965911.1|2.55E-170PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X1 [Setaria italica]
Swissprottr|Q9FVJ3|AGD12_ARATH3.00E-167ADP-ribosylation factor GTPase-activating protein AGD12
trEMBLtr|K3XY59|K3XY59_SETIT1.00E-170Uncharacterized protein {ECO:0000313|EnsemblPlants:Si006867m}
TAIRAT4G21160_21.00E-85Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000155300995326205-
Transcript Sequence

Network for GWHGAAEX004633

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01412.17ArfGap161311.40E-37
PF00168.29C21762662.50E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12486SMAP Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0005096Molecular FunctionGTPase activator activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.310
SRR2545915Juvenile tuber58.350
SRP108465SRR5643513five period of Gastrodia elata23.380
SRR5643514five period of Gastrodia elata23.000
SRR5643515five period of Gastrodia elata21.960
SRR5643524five period of Gastrodia elata21.730
SRR5643525five period of Gastrodia elata19.920
SRR5643528five period of Gastrodia elata21.660
SRR5643658five period of Gastrodia elata21.160
SRR5643659five period of Gastrodia elata24.730
SRR5643660five period of Gastrodia elata27.840
SRR5643661five period of Gastrodia elata23.350
SRR5643662five period of Gastrodia elata25.010
SRR5643663five period of Gastrodia elata23.570
SRR5643664five period of Gastrodia elata26.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.150
SRR6049655Rhizomagastrodiae_C368-T10_good_134.650
SRR6049656Rhizomagastrodiae_C368-T07_good_149.800
SRR6049657Rhizomagastrodiae_C368-T07_good_168.420
SRR6049658Rhizomagastrodiae_C368-T04_good_179.300
SRR6049659Rhizomagastrodiae_C368-T04_good_187.640
SRR6049660Rhizomagastrodiae_C368-T01_good_174.110
SRR6049661Rhizomagastrodiae_C368-T04_good_172.010
SRR6049662Rhizomagastrodiae_C368-T01_good_139.260
SRR6049663Rhizomagastrodiae_C368-T01_good_151.600
SRR6049664Rhizomagastrodiae_C368-T10_good_131.220
SRR6049665Rhizomagastrodiae_C368-T10_good_131.220
SRP279888GastroGastrodia elata tuber 45.72
JuvenJuvenile tuber35.50
Mother_GastroMother tuber of Gastrodia elata 32.56
Mother_JuvenMother tuber of Juvenile 26.93