Detail information of GWHGAAEX004635/evm.TU.scaffold_151.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427718232|ref|YP_007066226.1|0glucose-1-phosphate adenylyltransferase [Calothrix sp. PCC 7507]
KOGKOG13220GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase
nrgi|597621872|gb|AHN15416.1|0AGPS1 [Gladiolus hybrid cultivar]
Swissprottr|P55228|GLGS_ARATH0Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic (Precursor)
trEMBLtr|X2G9K3|X2G9K3_9ASPA0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}
TAIRAT5G483000ADP glucose pyrophosphorylase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000155375608399557-
Transcript Sequence

Network for GWHGAAEX004635

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00483.22NTP_transferase973707.20E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00975glgC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026

Gene Ontology

GO term OntologyName
GO:0005978Biological Processglycogen biosynthetic process
GO:0009058Biological Processbiosynthetic process
GO:0008878Molecular Functionglucose-1-phosphate adenylyltransferase activity
GO:0016779Molecular Functionnucleotidyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms261.100
SRR2545915Juvenile tuber268.880
SRP108465SRR5643513five period of Gastrodia elata75.870
SRR5643514five period of Gastrodia elata60.520
SRR5643515five period of Gastrodia elata54.810
SRR5643524five period of Gastrodia elata42.950
SRR5643525five period of Gastrodia elata23.150
SRR5643528five period of Gastrodia elata32.450
SRR5643658five period of Gastrodia elata23.650
SRR5643659five period of Gastrodia elata186.190
SRR5643660five period of Gastrodia elata167.750
SRR5643661five period of Gastrodia elata155.990
SRR5643662five period of Gastrodia elata289.930
SRR5643663five period of Gastrodia elata342.570
SRR5643664five period of Gastrodia elata312.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1296.420
SRR6049655Rhizomagastrodiae_C368-T10_good_1222.180
SRR6049656Rhizomagastrodiae_C368-T07_good_1387.170
SRR6049657Rhizomagastrodiae_C368-T07_good_1186.930
SRR6049658Rhizomagastrodiae_C368-T04_good_1213.040
SRR6049659Rhizomagastrodiae_C368-T04_good_1159.710
SRR6049660Rhizomagastrodiae_C368-T01_good_1111.360
SRR6049661Rhizomagastrodiae_C368-T04_good_1299.340
SRR6049662Rhizomagastrodiae_C368-T01_good_1192.940
SRR6049663Rhizomagastrodiae_C368-T01_good_1122.640
SRR6049664Rhizomagastrodiae_C368-T10_good_1230.290
SRR6049665Rhizomagastrodiae_C368-T10_good_1230.290
SRP279888GastroGastrodia elata tuber 368.02
JuvenJuvenile tuber106.82
Mother_GastroMother tuber of Gastrodia elata 24.12
Mother_JuvenMother tuber of Juvenile 60.26