Detail information of GWHGAAEX004637/evm.TU.scaffold_151.20
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|291613738|ref|YP_003523895.1| | 2.00E-33 | serine/threonine protein kinase [Sideroxydans lithotrophicus ES-1] |
| nr | gi|743844275|ref|XP_010938300.1| | 0 | PREDICTED: serine/threonine-protein kinase TIO [Elaeis guineensis] |
| Swissprot | tr|Q2QAV0|TIO_ARATH | 0 | Serine/threonine-protein kinase TIO |
| trEMBL | tr|C5XHT6|C5XHT6_SORBI | 0 | Putative uncharacterized protein Sb03g045640 {ECO:0000313|EMBL:EES04209.1} |
| TAIR | AT1G50240 | 0 | Protein kinase family protein with ARM repeat domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000155 | 413366 | 512602 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004637
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 6 | 256 | 9.70E-78 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | ULK_Fused |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K06228 | FU | Hedgehog signaling pathway - fly | map04341 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 22.400 |
| SRR2545915 | Juvenile tuber | 22.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.880 |
| SRR5643514 | five period of Gastrodia elata | 18.430 | |
| SRR5643515 | five period of Gastrodia elata | 17.680 | |
| SRR5643524 | five period of Gastrodia elata | 18.940 | |
| SRR5643525 | five period of Gastrodia elata | 12.390 | |
| SRR5643528 | five period of Gastrodia elata | 11.940 | |
| SRR5643658 | five period of Gastrodia elata | 13.330 | |
| SRR5643659 | five period of Gastrodia elata | 17.090 | |
| SRR5643660 | five period of Gastrodia elata | 16.020 | |
| SRR5643661 | five period of Gastrodia elata | 14.350 | |
| SRR5643662 | five period of Gastrodia elata | 13.570 | |
| SRR5643663 | five period of Gastrodia elata | 16.150 | |
| SRR5643664 | five period of Gastrodia elata | 13.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.050 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.260 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.270 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 30.690 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 33.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.940 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 30.690 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.030 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.550 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.430 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.430 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 21.93 |
| Juven | Juvenile tuber | 40.99 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.31 | |
| Mother_Juven | Mother tuber of Juvenile | 32.78 |