Gene detail

Detail information of GWHGAAEX004640/evm.TU.scaffold_151.23

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0243	Kinesin-like protein
nr	gi\|695056093\|ref\|XP_009416255.1\|	PREDICTED: 125 kDa kinesin-related protein-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|O23826\|K125_TOBAC	125 kDa kinesin-related protein
trEMBL	tr\|M0TXB6\|M0TXB6_MUSAM	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT3G45850	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000155	562576	572450	+

Transcript Sequence
>GWHTAAEX004640 CTTCCAACGTTCGAATCGTTTTCATAACGGCTAGTCCGGCAGTCGATGATCTCCACCCATTTGCCTTCCCCTCTTCTTATTTCACAGATAGTCGCCGGCTTTGCCTTCATAAGAAAAGCCTAAACTCAGTATCAAACTCTTGCGTTCTTTTGCTTTGAAGGCATCGGCAACTTTGCATCCTAGTTTTTCATTTATCTTCTTTCTATCCTCAGTTAGTAATACGTCTCCAAAGTTTTCTTCCTTTCTTCTTCCTATTTTGGCTTTTATCGACGGTTTTCTCGCCTTTAATTTATCTGTTTTGCCACTAGCTCGTAAATCCACCGTTGATCAGTTCTTGATCGCAATTAGGGTTTATAGCTGAAGGCAGATTCGGGAGTTTCTCCTCCTGTTTAGTGATGGATAATTCTCATCGAAAAGGCGTCTTTGTTCCTGTATCGCCGTCGCAAACTGTTCAATCAACTGATAGATCCAGTAAAGGATCCAATGATTGCGGCAACAATTCTAGCAACAAGCAGGGGGTCAATATTCAAGTCATTGTCCGCTGCAGACCTTTAAATGACGATGAGAAGAGAGTTAACACACCAGCCATGGTAACCTGTAATGAGCAGCGGAGAGAAGTTTCTTCTGTTCAGAACATAGCTAACAAGAAGATTGATAAGACCTTTACTTTTGATAAAGTTTTTGGCCCATCGTCGCAACAAAGCAATTTGTTTGAGCAAGCAGTTTCCCCTATCGTGAGAGAAGTTCTTGAGGGTTATAACTGCACTATATTTGCCTATGGCCAGACAGGCACTGGAAAAACTTACACTATGGAAGGTGGAGGAGCTGCTAAAGCAAAGATCAATGGTAAATTTCCTAGGGATGCTGGTGTTATTCCAAGGTCCGTTCGTCAAATCTTTGATAAGCTTGAGTCCCAGAATGCCGAGTACAGCGTGAAAGTTACATTTCTTGAGCTATATAACGAGGAGATAACTGATCTTCTGGCACCTGAAGAGTTGAGAATACTAGATGACAAGTCCAAGAAGCCTATAGCTCTGATGGAAGATGGAAAGGGAGGGGTGTTTGTGAGAGGACTTGAAGAAGAGATAGTTACAACTGCTAGTGAAATCTATGAAATATTAGAGAAAGGTTCTTCAAAGAGGCGTACTGCAGAAACATTGCTCAACAAGCAAAGCAGTAGATCACATTCAATTTTTTCAATTACAATACATATTAAAGAGTGTACTCCGGAGGGTGAGGAGATGATCAAATGTGGGAAACTTAATCTGGTTGATCTAGCTGGTTCCGAAAACATTTCGAGGTCAGGTGCTAGAGATAATAGGGCAAGGGAAGCTGGGGAAATTAATAAAAGCTTGCTTACACTTGGTCGGGTTATCAATGCTCTTGTTGATCACTCTGGCCATATTCCATATAGGGATAGCAAATTAACAAGACTTTTGAGGGATTCTTTGGGAGGAAAAACAAAGACTTGCATTATTGCAACGATATCTCCTTCCATACACTGTTTGGAAGAAACATTGAATACATTGGATTATGCGCACCGTGCTAAAAACATTAAGAATAAGCCAGAGATCAATCAAAAGATGATGAAATCTGCAATGATCAAGGATTTATACTTCGAGATTGATCGTCTTAAACAAGAATTATATGCTGCTAGAGAAAAGAATGGCATATACATTCCAAAAGATTTTTTTCTGCAAGATGAAGCCTTAAAAAAGGCAACATCGGACAAAATGGAGAGTTTGGAAGTTCAATTGGAATTAAGGGACAAGGAATTTGTAGGGCTGCAAGATCTTTTCAATTCTGAAAAGTTGCTGAATGCAGATCTAAGTGATAAGCTTGAAAAGACAAAGATGCAACTGGATGAAAAGGAGCATTCCTTCTCTGAACTAGAACAACGTTATAAACAAGCAAATTTGGCTATTAAAGAAAAGCAGTATCTAATATCTAATCTCTTAAAGTCAGAGAAGGTGCTTGTAGAGAATGCTTTGGAGCTTCGATCTGAACTTGAGAGTACAGCAGAAGATGTTTCTGTCCTGTTTTCTAAAATTGCAAGGAAAAACAAGATTGAAGATGGAAATAAAGTTCTCCTTCAAAAATTTACTTCCCAATTGGCTGAGCAGGTGGGTCTTTTACACAAGAATGTCTCCACATCTGTGACACAACAAGAGACTTATCTCATACAATTGGAAGAGGAAGTGAGATCATTTATATCTGCCAAGATTAAGAACACTAAAGAACTCCATGGTTGGCTTGAAAGATTGGAAGATGTGTATGGCAGTAGTATAAAAAACATGGAAGGAGTTGCTGATGAACTTAAGAACAATTCACATTCAACTTTTGAGAAATTCAACTCTAAAATATCAACGCATTCTTGTGAGCTGGGAGATTTTTTCAAAAATATTGCTTATGAGGGAAATCATTTACTTGATGAGCTAAAATGTAGCCTGACTATGATGGAAGATAAATTATCTTCTTTCTTAAAGAAACAGCAAGAGGGGCACCTAAAAACTTTGGAAGCTACACGATCTATTTCCAAGATCACTGCTAGCTTCTTTTGTAACTTAGATGCTTATGCAACTAAAATAAACAAGGTTTTAGTAGAGGCAGAGATTGTTAGAAACAAACAATTACAAGATCTTGAAAAGAAATTGGAGGAGAATGCAGCTAATGAAAAAAAACAATTTCTGGCAAAGGTAGAAGAAATGATCGAAAATTCAAATTCTAAGAAGAAAAAGCTGGTTCAAGATGCAGTTTATTCTCTTCAAAAGACAGATGGTGAAAAAACTAGCACTTTGCTACGGGAGCTATCTTATGCACAAAATTTTACTCATGAAATGAAGGATGAATGGAATTTCTATATGTTAGAAACTGAAAAGAACTACCATGAAGATACCACAACAATAGAGAATGAAAGAATGGTCATAGAAAAAGGCCTACATGATTGTCAAACAATGGCAACAACAGGTTTACAAAAATGGGATACAGCTTGCAGTTCCTTGCTTACCCTAGAACAAAGCAATATATCATCAATGGAATCCCTTGTCAAAAACGGTATGGAAGCAAATGATTTAATACGCTCAAGATTGCCATCTATTTTGTTGACTACTCTACAAGATAAGGAAAGTGCATACAAGTGCTTAATTTCATCTATTGATGGATCATTGAATCTTGACCAAAAAACTTGTGAGAACATTGGTTCCTTGGTCATTCCCTCTCGTGCGGGGTTGAGAGAATTACAAATTGGGCACCATCACAACACCACCGGGATCACAGAAAATGCGCAGAATTACTTGGAGAAGGAATACATGGTGGACGAAGACGTGCGCCTAACACCGAGAATAATTAATGTTCCAACTGTGGCCAACATTGAGGAGCTAAGAACCCCAGGTTTCGAAGAGTTGCTAAAATCTTGTGAGGCAAAGCCTGACTTGAGCAATAAGGCTGGTGGAGAAGGAAAACAATTTTTTGGATCATACGAGACTCAAGGACAACATTTACCTAGAGATTTTAGAAATCCACTAACTCTAAGAAATTGATAATTGGCAAGGATTTTTGAAGCCTTTCAATTGTTTTTTGTACTTTTGCATGTTGTTATAATTTAAGAAATTTTTTGTATATAATGTTAATTCAACAACCTTACATTATCCATCATCCATGGATAATGTAGATAAGAATTTCCAGCTATCCATCGTCCAGCATAACAACCTTCCATTATAATGTAGATAGATGCCATTTCAAATCACTTGTTATACTTTATAATATTTTATGATATAGTTAAAGAAAATGATCATAATGTAGAAAAATCATTCAGAGAACTTCAAT

Network for GWHGAAEX004640

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	49	387	6.10E-121

Protein Sequence

>GWHPAAEX004640
MDNSHRKGVFVPVSPSQTVQSTDRSSKGSNDCGNNSSNKQGVNIQVIVRCRPLNDDEKRVNTPAMVTCNEQRREVSSVQNIANKKIDKTFTFDKVFGPSSQQSNLFEQAVSPIVREVLEGYNCTIFAYGQTGTGKTYTMEGGGAAKAKINGKFPRDAGVIPRSVRQIFDKLESQNAEYSVKVTFLELYNEEITDLLAPEELRILDDKSKKPIALMEDGKGGVFVRGLEEEIVTTASEIYEILEKGSSKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGARDNRAREAGEINKSLLTLGRVINALVDHSGHIPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLNTLDYAHRAKNIKNKPEINQKMMKSAMIKDLYFEIDRLKQELYAAREKNGIYIPKDFFLQDEALKKATSDKMESLEVQLELRDKEFVGLQDLFNSEKLLNADLSDKLEKTKMQLDEKEHSFSELEQRYKQANLAIKEKQYLISNLLKSEKVLVENALELRSELESTAEDVSVLFSKIARKNKIEDGNKVLLQKFTSQLAEQVGLLHKNVSTSVTQQETYLIQLEEEVRSFISAKIKNTKELHGWLERLEDVYGSSIKNMEGVADELKNNSHSTFEKFNSKISTHSCELGDFFKNIAYEGNHLLDELKCSLTMMEDKLSSFLKKQQEGHLKTLEATRSISKITASFFCNLDAYATKINKVLVEAEIVRNKQLQDLEKKLEENAANEKKQFLAKVEEMIENSNSKKKKLVQDAVYSLQKTDGEKTSTLLRELSYAQNFTHEMKDEWNFYMLETEKNYHEDTTTIENERMVIEKGLHDCQTMATTGLQKWDTACSSLLTLEQSNISSMESLVKNGMEANDLIRSRLPSILLTTLQDKESAYKCLISSIDGSLNLDQKTCENIGSLVIPSRAGLRELQIGHHHNTTGITENAQNYLEKEYMVDEDVRLTPRIINVPTVANIEELRTPGFEELLKSCEAKPDLSNKAGGEGKQFFGSYETQGQHLPRDFRNPLTLRN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.310
SRP064423	SRR2545915	Juvenile tuber	0.220
SRP108465	SRR5643513	five period of Gastrodia elata	4.920
	SRR5643514	five period of Gastrodia elata	7.660
	SRR5643515	five period of Gastrodia elata	4.880
	SRR5643524	five period of Gastrodia elata	5.700
	SRR5643525	five period of Gastrodia elata	0.500
	SRR5643528	five period of Gastrodia elata	0.670
	SRR5643658	five period of Gastrodia elata	0.460
	SRR5643659	five period of Gastrodia elata	0.140
	SRR5643660	five period of Gastrodia elata	0.100
	SRR5643661	five period of Gastrodia elata	0.040
	SRR5643662	five period of Gastrodia elata	0.090
	SRR5643663	five period of Gastrodia elata	0.190
	SRR5643664	five period of Gastrodia elata	0.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.650
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.150
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.920
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.180
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.480
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.430
SRP279888	Gastro	Gastrodia elata tuber	0.32
	Juven	Juvenile tuber	0.08
	Mother_Gastro	Mother tuber of Gastrodia elata	0.67
	Mother_Juven	Mother tuber of Juvenile	0.16