Detail information of GWHGAAEX004647/evm.TU.scaffold_151.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10305.00E-61Predicted Ca2+-dependent phospholipid-binding protein
nrgi|743859161|ref|XP_010942608.1|8.09E-78PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Elaeis guineensis]
Swissprottr|Q8L7A4|AGD11_ARATH1.00E-38Probable ADP-ribosylation factor GTPase-activating protein AGD11
trEMBLtr|M0SNG9|M0SNG9_MUSAM4.00E-73Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P13040_001}
TAIRAT5G477105.00E-61Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000155731293736798+
Transcript Sequence

Network for GWHGAAEX004647

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00168.29C261021.90E-23
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.610
SRR2545915Juvenile tuber46.430
SRP108465SRR5643513five period of Gastrodia elata19.240
SRR5643514five period of Gastrodia elata21.080
SRR5643515five period of Gastrodia elata21.160
SRR5643524five period of Gastrodia elata20.930
SRR5643525five period of Gastrodia elata24.500
SRR5643528five period of Gastrodia elata17.610
SRR5643658five period of Gastrodia elata26.430
SRR5643659five period of Gastrodia elata36.600
SRR5643660five period of Gastrodia elata36.700
SRR5643661five period of Gastrodia elata36.860
SRR5643662five period of Gastrodia elata27.910
SRR5643663five period of Gastrodia elata41.370
SRR5643664five period of Gastrodia elata29.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.940
SRR6049655Rhizomagastrodiae_C368-T10_good_110.150
SRR6049656Rhizomagastrodiae_C368-T07_good_112.160
SRR6049657Rhizomagastrodiae_C368-T07_good_114.090
SRR6049658Rhizomagastrodiae_C368-T04_good_18.600
SRR6049659Rhizomagastrodiae_C368-T04_good_19.310
SRR6049660Rhizomagastrodiae_C368-T01_good_19.030
SRR6049661Rhizomagastrodiae_C368-T04_good_19.470
SRR6049662Rhizomagastrodiae_C368-T01_good_111.290
SRR6049663Rhizomagastrodiae_C368-T01_good_110.680
SRR6049664Rhizomagastrodiae_C368-T10_good_111.380
SRR6049665Rhizomagastrodiae_C368-T10_good_111.380
SRP279888GastroGastrodia elata tuber 31.31
JuvenJuvenile tuber12.69
Mother_GastroMother tuber of Gastrodia elata 15.70
Mother_JuvenMother tuber of Juvenile 10.99