Gene detail

Detail information of GWHGAAEX004652/evm.TU.scaffold_151.36

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743775457\|ref\|XP_010918107.1\|	0	PREDICTED: WEB family protein At5g55860-like [Elaeis guineensis]
Swissprot	tr\|Q9LVQ4\|Y5586_ARATH	4.00E-143	WEB family protein At5g55860
trEMBL	tr\|J3NCK2\|J3NCK2_ORYBR	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB12G17100.1}
TAIR	AT5G55860	1.00E-142	Plant protein of unknown function (DUF827)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000155	838745	867624	+

Transcript Sequence
>GWHTAAEX004652 CTAAAGCCCAATTTTTTATGCTAGTAGAAAATTTTCAAAGTGCTTAAAATTTGAACTTTTGATGTTTATTTGTTTATAAAAAATAAAAGGTAAAAATGGTATACGGATGTAAAAATTTGGGAATGTCTGTGTGGTTAGTTAGGGCGTACCTGCGCGTTTGATATGAGGTCGGCAGTGACTGGAAGAGGGCCAAATGTTCAACGGCGTCCGGCGAGGGTCGATGAGTCTCGTTAGCTGCTGCTGTAAGGTTATACTTCCTTTCGTTTTCTTAGAATCGTGCGAGGGCGGCTACCTGAAGTTGCCTTATCCATTTATTCTTCACGAGGATCAAAGATAAACATTCAACTTGGATATAAATCTCTTACATAGAAAGCATTTGGGGATAACCAAATAAGAAAAAACTCAAAATGATGGGTGTTAAGGCTCATCCTACTTCCAGTGATTCACCCAAAGTGGAGGTGGGGGAGATAGACACAAGGGTGCCATTTGAATCTGTTAAAGCTGCTGTCAGCTTATTTGGTGAGGTTACAATTCCAAGTGATAGGGCAGTTCCAAGGAAAAAGAGTCCATCAAATGAACAGAAAGCATTAGGAACAGAGACTAAACTTCATATAGCCCAGAAAGAGCTAAACAAGCTGAAGGAACAGCTGCATAATGCAGAAACGGCAAGGGTTCAAGCACTTGCCGAACTAGAAAAAGCTAAGGAAACTGTTGAGGAGCTTACACAGAAACTGAATGCCATCAATGAGTCAAAGGAGGCTGCGATAAAAGCAACAGAAGCTGCCAAAAGCCAGACAAGGCTGCTTGAAGACGTAAGCCCGAGTGACCATTCTGAGAAGGATGATTCTTGGAGGCATGAACTAGAGAGTGCCAGAGCGCAGCATGCAGCTGCGTTCGCCAAACTTGACGCCTCAAAAAAAGAGCTCCGGACAATGCGAAAGGAGTTTGAGGCATCCATGGATGCTAAAGTTGCAGCCATTGACCAAGAATTTGAGGCGAAGCAGCTCTCTGAAGCGAATAAAGAGAGGGCCGCTCAGCTTGCCCGGGATATTGCAGATATAAACGAGTCACTCGTGCATGTTAAACTCGCTACGGAGCAGGCCAGACAAGACGAGTCCAAAGTTCATTTGGAAAAGGAAATGAGCCGGCGGGCTTACAAGCTAGCTCTTGAAGAGAATGAGGCCAAATTGGCCTCCTTAAGGAAAGATTTTAATCCAGAGCTTAATGAGCACCTGAAGAAGAAGTTGGAGGAGACCGAAGCTGAGATCCGCATGGTTCAGCAGCAGATGAGCGACGCCAGGGCAGCGGATTTAGAGTCTATCACTACGGTGACTACCGAACTGGATGGTGCGAAAGAGTTTCTGCGTAAAGTGCTGGAGGATGAAGCTTCTCTCAAGGGTGAGCTGGACTCTTTGAAGCTGCAGCTGGAGGTATTGAAGAAGGAAAATTCTGAACTTCAGGTAATGGATGCGGAAACGGAAGCCCTTGCTTCGAATCTTCACCTGAAGCTTCAGAAATGCAAGTCAGAACTCGAGTCCGCCATGGTTGCAGAGTCAAGGGCGAGCTTGGAGTCTAATGACCTAACATCTGCCCTCCAGCAGTTGTCTGCGCAGTCCCTGGCTGCACAGACAGGAGCAGAAGAAATGAAGGCCAAGACTGTTGAACTGAGGAGCGAAGCTGGTGCCGCCAAGACTGCCTTAGTTGAGGCAGAGGCGAAGCTACAGGTTGCCTTGAGAGATGCCGAAGAGGCAAAGGCGGCTGAGGCAAGGGCCCTTAACCAGATCAAAGAACTTTCAGATAAGGCCAATGCGGTCAGGTCTTCGACCTCAGAATCAGGCGCAAAAATCACGATCTCGAGGGAAGAGTTTGAGTCTTTGAGCCGTAAGGTCGAGGAGTCGGAGAAGCTGACAGAGATGAAGGTGGCCGCTGCAATGGCACAGGTTGAAGCCGTGAGGGCCAGCGAGAACGAGGCAAACAAGAGGCTGGAGGCTGTGAGGAAGGAGATTGAGGACACTGGTCTGGCCACAGAAGAGGCCCTGAAGCGGGCGGACATGGCAGAGGCTGCCAAGCGAGCAGTAGAGGGAGAGCTAAGGAGGTGGCGTGAGAAGGAGCAGAAGATGCTGGTCGAGACTACGGCACAGTCGACGCCGCCGGGGGCTAATATTCCAAAGGCCAGCCCGCCGCCTCCTGCTGAGAAATTCGAGCGCAAAGATAATGGCACACCCTCCAAAAAACAACTTCTCCCAGTTCTCAGCGGTATATTCCACAGGAAGAAGAGCCATATTGAGGGTAACCCCTCGCTTCCGCCGGACGAGAAACACAAGAAGCATGCATAATTGTTCTCTTTTTTATGATCTCGGAATACAGCCGAGGGGGTTTGATTTCAATCTGAGGCAAAAATGTGCGAGTCGGGCGGAGGAGCTCGTTTTTGGATTGTTCTATGGAATCAGATGGCTTGGCTGCAGCAGCCATTTGGGCTCTTCTTTCTGGCGCCTCTGGTAGTTTGGGAGGGAAAGGAATATTTCCTGTGTTTGACAGTCCTGTACCTGTTTAAAGTTTCCATATGTATCGTGTTTCCTTGTACTAAAATAGTTGAGAATTTAAAAGGAGTAATGTTAGAACACCCTCAGTTTGCTCAAATAGTTTTTGCTTTGAAAAAATTCAAATATTTTGAGTGTGGGTTTGTTAATAAGCGTAGCCATATTTTTTTTCTCAATATTTACTTATATTTTTGCAC

Network for GWHGAAEX004652

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05701.10	WEMBL	20	570	5.60E-44

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	57.560
SRP064423	SRR2545915	Juvenile tuber	41.520
SRP108465	SRR5643513	five period of Gastrodia elata	36.170
	SRR5643514	five period of Gastrodia elata	32.920
	SRR5643515	five period of Gastrodia elata	33.860
	SRR5643524	five period of Gastrodia elata	31.520
	SRR5643525	five period of Gastrodia elata	33.690
	SRR5643528	five period of Gastrodia elata	30.560
	SRR5643658	five period of Gastrodia elata	35.650
	SRR5643659	five period of Gastrodia elata	46.350
	SRR5643660	five period of Gastrodia elata	49.720
	SRR5643661	five period of Gastrodia elata	45.820
	SRR5643662	five period of Gastrodia elata	53.830
	SRR5643663	five period of Gastrodia elata	46.150
	SRR5643664	five period of Gastrodia elata	54.620
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	38.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.180
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	35.600
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	39.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	35.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	42.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	37.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	37.100
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	36.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	37.620
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.390
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.390
SRP279888	Gastro	Gastrodia elata tuber	38.85
	Juven	Juvenile tuber	33.23
	Mother_Gastro	Mother tuber of Gastrodia elata	32.00
	Mother_Juven	Mother tuber of Juvenile	27.51