Detail information of GWHGAAEX004654/evm.TU.scaffold_151.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|150388799|ref|YP_001318848.1|7.00E-49HAD family hydrolase [Alkaliphilus metalliredigens QYMF]
KOGKOG28826.00E-159p-Nitrophenyl phosphatase
nrgi|695080865|ref|XP_009387920.1|3.83E-177PREDICTED: phosphoglycolate phosphatase 2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8GWU0|PGP2_ARATH2.00E-159Phosphoglycolate phosphatase 2
trEMBLtr|M0UBB2|M0UBB2_MUSAM1.00E-177Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP22040_001}
TAIRAT5G477606.00E-1592-phosphoglycolate phosphatase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000155888322905399-
Transcript Sequence

Network for GWHGAAEX004654

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13344.5Hydrolase_6371383.90E-34
PF13242.5Hydrolase_like2343081.80E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19269PGP, PGLP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630

Gene Ontology

GO term OntologyName
GO:0016791Molecular Functionphosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.480
SRR2545915Juvenile tuber20.740
SRP108465SRR5643513five period of Gastrodia elata21.790
SRR5643514five period of Gastrodia elata49.440
SRR5643515five period of Gastrodia elata26.330
SRR5643524five period of Gastrodia elata45.050
SRR5643525five period of Gastrodia elata42.090
SRR5643528five period of Gastrodia elata47.140
SRR5643658five period of Gastrodia elata46.990
SRR5643659five period of Gastrodia elata22.280
SRR5643660five period of Gastrodia elata21.670
SRR5643661five period of Gastrodia elata18.570
SRR5643662five period of Gastrodia elata25.940
SRR5643663five period of Gastrodia elata23.330
SRR5643664five period of Gastrodia elata26.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.740
SRR6049655Rhizomagastrodiae_C368-T10_good_116.020
SRR6049656Rhizomagastrodiae_C368-T07_good_123.630
SRR6049657Rhizomagastrodiae_C368-T07_good_114.180
SRR6049658Rhizomagastrodiae_C368-T04_good_110.900
SRR6049659Rhizomagastrodiae_C368-T04_good_110.040
SRR6049660Rhizomagastrodiae_C368-T01_good_130.220
SRR6049661Rhizomagastrodiae_C368-T04_good_114.000
SRR6049662Rhizomagastrodiae_C368-T01_good_1103.780
SRR6049663Rhizomagastrodiae_C368-T01_good_186.380
SRR6049664Rhizomagastrodiae_C368-T10_good_137.580
SRR6049665Rhizomagastrodiae_C368-T10_good_137.580
SRP279888GastroGastrodia elata tuber 36.16
JuvenJuvenile tuber20.01
Mother_GastroMother tuber of Gastrodia elata 17.07
Mother_JuvenMother tuber of Juvenile 13.20