Detail information of GWHGAAEX004675/evm.TU.scaffold_151.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225444291|ref|XP_002263115.1|4.30E-143PREDICTED: probable WRKY transcription factor 31 [Vitis vinifera]
Swissprottr|Q9XEC3|WRK42_ARATH4.00E-118Probable WRKY transcription factor 42
trEMBLtr|M0SZ54|M0SZ54_MUSAM2.00E-147Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P16750_001}
TAIRAT4G044501.00E-117WRKY family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015515507901552934-
Transcript Sequence

Network for GWHGAAEX004675

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY2052622.20E-27
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.020
SRR2545915Juvenile tuber8.970
SRP108465SRR5643513five period of Gastrodia elata74.930
SRR5643514five period of Gastrodia elata54.600
SRR5643515five period of Gastrodia elata154.280
SRR5643524five period of Gastrodia elata56.640
SRR5643525five period of Gastrodia elata73.190
SRR5643528five period of Gastrodia elata215.770
SRR5643658five period of Gastrodia elata34.830
SRR5643659five period of Gastrodia elata50.320
SRR5643660five period of Gastrodia elata10.450
SRR5643661five period of Gastrodia elata27.540
SRR5643662five period of Gastrodia elata55.440
SRR5643663five period of Gastrodia elata24.640
SRR5643664five period of Gastrodia elata96.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1154.660
SRR6049655Rhizomagastrodiae_C368-T10_good_1116.180
SRR6049656Rhizomagastrodiae_C368-T07_good_1116.390
SRR6049657Rhizomagastrodiae_C368-T07_good_1119.160
SRR6049658Rhizomagastrodiae_C368-T04_good_1121.740
SRR6049659Rhizomagastrodiae_C368-T04_good_1139.140
SRR6049660Rhizomagastrodiae_C368-T01_good_1231.390
SRR6049661Rhizomagastrodiae_C368-T04_good_1132.360
SRR6049662Rhizomagastrodiae_C368-T01_good_198.860
SRR6049663Rhizomagastrodiae_C368-T01_good_1209.200
SRR6049664Rhizomagastrodiae_C368-T10_good_1104.120
SRR6049665Rhizomagastrodiae_C368-T10_good_1104.120
SRP279888GastroGastrodia elata tuber 19.96
JuvenJuvenile tuber28.25
Mother_GastroMother tuber of Gastrodia elata 1,056.87
Mother_JuvenMother tuber of Juvenile 739.29