Detail information of GWHGAAEX004677/evm.TU.scaffold_151.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16852.00E-44Uncharacterized conserved protein
nrgi|672107640|ref|XP_008780479.1|2.79E-67PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing protein 1-like [Phoenix dactylifera]
trEMBLtr|K4B404|K4B404_SOLLC2.00E-58Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g111420.2.1}
TAIRAT3G586602.00E-44Ribosomal protein L1p/L10e family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015516944171695727-
Transcript Sequence

Network for GWHGAAEX004677

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00687.20Ribosomal_L1382322.80E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.700
SRR2545915Juvenile tuber9.650
SRP108465SRR5643513five period of Gastrodia elata15.370
SRR5643514five period of Gastrodia elata13.420
SRR5643515five period of Gastrodia elata13.130
SRR5643524five period of Gastrodia elata12.940
SRR5643525five period of Gastrodia elata14.090
SRR5643528five period of Gastrodia elata19.490
SRR5643658five period of Gastrodia elata13.450
SRR5643659five period of Gastrodia elata18.550
SRR5643660five period of Gastrodia elata17.580
SRR5643661five period of Gastrodia elata19.300
SRR5643662five period of Gastrodia elata14.150
SRR5643663five period of Gastrodia elata14.950
SRR5643664five period of Gastrodia elata15.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.190
SRR6049655Rhizomagastrodiae_C368-T10_good_116.150
SRR6049656Rhizomagastrodiae_C368-T07_good_113.790
SRR6049657Rhizomagastrodiae_C368-T07_good_113.320
SRR6049658Rhizomagastrodiae_C368-T04_good_111.790
SRR6049659Rhizomagastrodiae_C368-T04_good_19.550
SRR6049660Rhizomagastrodiae_C368-T01_good_114.910
SRR6049661Rhizomagastrodiae_C368-T04_good_111.000
SRR6049662Rhizomagastrodiae_C368-T01_good_113.490
SRR6049663Rhizomagastrodiae_C368-T01_good_113.890
SRR6049664Rhizomagastrodiae_C368-T10_good_115.750
SRR6049665Rhizomagastrodiae_C368-T10_good_115.750
SRP279888GastroGastrodia elata tuber 15.34
JuvenJuvenile tuber21.73
Mother_GastroMother tuber of Gastrodia elata 20.57
Mother_JuvenMother tuber of Juvenile 20.90