Detail information of GWHGAAEX004680/evm.TU.scaffold_151.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262199716|ref|YP_003270925.1|4.00E-25serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
KOGKOG01982.00E-95MEKK and related serine/threonine protein kinases
nrgi|695072837|ref|XP_009383559.1|4.03E-122PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FZ36|M3K2_ARATH5.00E-45Mitogen-activated protein kinase kinase kinase 2
trEMBLtr|M0RRM1|M0RRM1_MUSAM6.00E-108Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P12410_001}
TAIRAT5G550902.00E-95mitogen-activated protein kinase kinase kinase 15

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015517350191736392+
Transcript Sequence

Network for GWHGAAEX004680

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase112582.70E-53
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE11

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.300
SRR2545915Juvenile tuber19.390
SRP108465SRR5643513five period of Gastrodia elata14.090
SRR5643514five period of Gastrodia elata8.030
SRR5643515five period of Gastrodia elata17.510
SRR5643524five period of Gastrodia elata8.820
SRR5643525five period of Gastrodia elata3.290
SRR5643528five period of Gastrodia elata24.580
SRR5643658five period of Gastrodia elata5.550
SRR5643659five period of Gastrodia elata37.170
SRR5643660five period of Gastrodia elata18.110
SRR5643661five period of Gastrodia elata30.240
SRR5643662five period of Gastrodia elata31.060
SRR5643663five period of Gastrodia elata21.840
SRR5643664five period of Gastrodia elata21.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.980
SRR6049655Rhizomagastrodiae_C368-T10_good_17.120
SRR6049656Rhizomagastrodiae_C368-T07_good_128.270
SRR6049657Rhizomagastrodiae_C368-T07_good_123.400
SRR6049658Rhizomagastrodiae_C368-T04_good_167.460
SRR6049659Rhizomagastrodiae_C368-T04_good_166.570
SRR6049660Rhizomagastrodiae_C368-T01_good_127.540
SRR6049661Rhizomagastrodiae_C368-T04_good_146.170
SRR6049662Rhizomagastrodiae_C368-T01_good_129.880
SRR6049663Rhizomagastrodiae_C368-T01_good_131.230
SRR6049664Rhizomagastrodiae_C368-T10_good_124.520
SRR6049665Rhizomagastrodiae_C368-T10_good_124.520
SRP279888GastroGastrodia elata tuber 12.44
JuvenJuvenile tuber12.46
Mother_GastroMother tuber of Gastrodia elata 46.71
Mother_JuvenMother tuber of Juvenile 6.32