Gene detail

Detail information of GWHGAAEX004693/evm.TU.scaffold_151.103

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|719961424\|ref\|XP_010248942.1\|	2.80E-117	PREDICTED: uncharacterized protein LOC104591427 [Nelumbo nucifera]
trEMBL	tr\|A0A067KRW6\|A0A067KRW6_JATCU	2.00E-110	Uncharacterized protein {ECO:0000313\|EMBL:KDP35035.1}
TAIR	AT1G15030	9.00E-74	Protein of unknown function (DUF789)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000155	2102778	2121839	+

Transcript Sequence
>GWHTAAEX004693 CCACATCGTTCGGCCAAGCGTCTCGAGTCCACGAGGTATTTCCGTCCTCGTCGCATTCCTCTAGTGATTTTAGAGTATTTCTGCTGCCCTGAGCTTCTTCGACACAAGGAGCAAACGATCGCCATTAGTCGATTTGCTCTTATAGCCAACTAAAAGCCGTTCTACAAGTTCGACTATCGTAATCTTGGTTTTGGTTCTAGGTTTTCTTGAAATGCTGGGGGCAACCTTGCAGATTGCTCGCGGCCACGGAGAAGACCGTTTCTACAGTCCCTCCAATGCTCGACGAAGCTACCAGCAGCATCTCCAATACCTTGGCAGGTCTAGAAGTGGCAGTTCTATCGGATATTCGTCCGTTCCCCCTCTGATTTTTCAAGAAAGGGCTGTCGTTCCCCACTGCATTGAGCCGGAGTATACACCTGAATCGGAAATAGACCCGTCTAATGATGAATCCACTTCATCTTTGTCGGCCCCTTCTGCCTCACCTTTGGTATCGGAGAATGCTTGTTCCACTAACTTGTTTCGCTTCTTGGAGTCGACGACTCCATCAATTTCTGCCCAGCTTTTCTCTAAGAAAAGTATGGGAGAATGCAGGACATGTGATATTGGGATCCGGCCATATTTTTCATTGGCGGAGCTTTGGGATTCTTTCAAGGAATGGAGTGCATACGGGGCTAGCGTTCCTCTGGTTCTGAACGATAGAGGTTACGTCGTCCAGTACTATGTGCCATATCTGTCGGGTATTCAGTTATATGGTAAATCTAGTGGCTCTAAAGACTTGAACAATGATGAAAGCTGTAAATATAATTCAGGAAAGCACATAAATTCAAAGGGCTTCACTCAGAACGCCTCCAAGTCTAACTTGAATAAATATTTACTAAGAAATAATGATGCTGACAAGTTGGATTTGGTTCCAAACAAAGACAATGAAACTGGGAATTCCGATGGCACACTGCTTTTTGAGTTCCTTGAACAGCGAGCTCCTCATAATCGAGAACCTCTAACAGACAAGATTACTAATCTTTCCCTCCACTTTCCTGAATTGAAGTATCTTAGAAGTTACGAATTGTTACCTACAAGTTGGATTTCTGTTGCGTGGTACCCTATCTATCGAATACCAACTGGGACAACATTAAAGGATCAAGATGCTTGTTTTCTTACGTTCCATTCTCTTTCAACACAAATGAAAGATGATGATGATGATGATGAGAAGATTTTTGGGCCATTCATTAGTTATGAGCAATGGAATGGCGTCCCAAAGATATGTCTCCCTGTCTTTGCTCTGGCCTCATACAAGTTGAGAGGTTCCATGTGGACTTATCCGAGTGAGGAATGCGGCAGCAAGCTCATTAGCTCCTTGCTAATGGCGGCTGATAATTGGCTGCGGCTGCTCAGGGTGAAGCTCCCGGATTATCAGTTCTTTGCATCTCATGGCGCAGGTCGCTGA

Network for GWHGAAEX004693

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05623.11	DUF789	100	403	5.90E-92

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.750
SRP064423	SRR2545915	Juvenile tuber	4.780
SRP108465	SRR5643513	five period of Gastrodia elata	3.320
	SRR5643514	five period of Gastrodia elata	3.560
	SRR5643515	five period of Gastrodia elata	2.560
	SRR5643524	five period of Gastrodia elata	2.610
	SRR5643525	five period of Gastrodia elata	2.560
	SRR5643528	five period of Gastrodia elata	2.660
	SRR5643658	five period of Gastrodia elata	2.570
	SRR5643659	five period of Gastrodia elata	4.970
	SRR5643660	five period of Gastrodia elata	4.390
	SRR5643661	five period of Gastrodia elata	4.890
	SRR5643662	five period of Gastrodia elata	4.030
	SRR5643663	five period of Gastrodia elata	7.380
	SRR5643664	five period of Gastrodia elata	3.550
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.960
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.260
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.160
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.630
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.920
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.430
SRP279888	Gastro	Gastrodia elata tuber	6.50
	Juven	Juvenile tuber	4.61
	Mother_Gastro	Mother tuber of Gastrodia elata	2.15
	Mother_Juven	Mother tuber of Juvenile	2.58