Gene detail

Detail information of GWHGAAEX004695/evm.TU.scaffold_151.106

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|328543573\|ref\|YP_004303682.1\|	5.00E-27	cytochrome P450 [Polymorphum gilvum SL003B-26A1]
KOG	KOG0156	1.00E-116	Cytochrome P450 CYP2 subfamily
nr	gi\|672206054\|ref\|XP_008779328.1\|	6.99E-144	PREDICTED: cytochrome P450 71A1-like [Phoenix dactylifera]
Swissprot	tr\|P24465\|C71A1_PERAE	8.00E-128	Cytochrome P450 71A1
trEMBL	tr\|B9RAS2\|B9RAS2_RICCO	3.00E-135	Cytochrome P450, putative {ECO:0000313\|EMBL:EEF51899.1}
TAIR	AT4G13310	1.00E-116	cytochrome P450, family 71, subfamily A, polypeptide 20

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000155	2226764	2228389	+

Transcript Sequence
>GWHTAAEX004695 CCGTATTTCCCATCGTCTCCTTCTTCCTAATGGCAGCCACCATGGTCGGCCTGCTGATCAAAAAAAGATCAAAAGCCTCTCTAGCAGCCCCAGCCAATCTGCCTCCCTCTCCCCCAGGCGCCCTTTCGGTCATTGGCCACATCCACCAAATATACAACCATCTAATCCACCACCGCCTCGCCGCCCTCTCTGCTCAGCACGGACCTCACATTCTCTTCATACGCCTCGGCTCCATCCCCAGCATTGTCATTTCCTCCGCAGAGACCACAGAGCACGTGTTCAAGACCCAAGACCTCTGCTTCGCCACCCGCCCTCCTTCCTCCATCGCCGGCCCGCTCACTTACGGCGCCCACGACCTCGCCTTCGCCCCGCACGGCGACTACTGGCGGTTCGTTCGAAAGCTGTGCGTCTCGCATTTGCTTAGCGCGAAGAGGGTGCGGTCTTTCGAGAGGGTGAGGCAGGAAGAATTGGCTCTGTTCCTTGCTGAATTGTCATCTGCCGCAGGCAACGACGCAACCCTCAATCTCAGCGAGATGATGATTAGCCTCACGAATGACATGATATGCAGGGTGGCTTTGGGAAAGAAGTATTATTCGGAGAGGAAGGGGTTTAATGAGATGTTGAAGGAGTTGGGGAGTTGCTTGCATTCTTTTTCTATTAGGGATTATGTGCCTTGGCTTGGTTTTCTGGATGAGATTGGAGAGCTGAATAGAAGAGTGAGAAGATGCTTCCAAAAGATGGATGGATTTCTCGATCAAGTTGTAGAAGATCATATACGATGGCAGGAGACTGGAGAAGATAAAAATGAGCATTGTGCAGACTTCGTTGACATCTTGTTGGTGGTAGATAAGGAGGATATTGGCCATTTGAAGTTTGACAGGAGAAGCCTCAAAGCCATAATCAATGATATGTTTATTGCTGGGACAGATACTCTGTCTAGCACATTAGAATGGGCGATGGCGGAGCTTCTGAACGACCCAACTGTAATGAAGAAGGCTCAATGTGAAATAAGACAAATCGTTGAATCCAAGACAAAAATATCAGATGAAGACACGAACAAAATGGCATATTTAATGGCAGTGGTCAAAGAAACACTAAGATTGCATCCGCCTTTTCCCATGTCAGCACCTCGTGAAACCCGACTAGATGCAAAGCTACATGGACACAATATTACGAAAAAAAATAGAGTCTGGATCAACATATGGGCGATTGGAAGGGATAGTGAGTACTGGGAGAAAGCAGAACAGTTTTGGCCTGAGAGGTTCATCTTGAACAACACAATGAAAGACGAGAATTCGACTATTCCAAAAAGCGATTTTCATTACATACCATTTGGGGGAGGAAGAAGAGGCTGTCCAGCAATAAACTTAAGTTATACTACAATAACTTATGTTATTGCAAATTTATTGTGCTATTTTAACTGGGAGATTGAAGAGAGTAACAAGAAGCAAGTGCTTGATATGACTGAATTTGCCATCATCAATGTGCGAAAAAAATTCCCTCTTCTTCTTATTCCTAAGCCAAATAAGTAG

Network for GWHGAAEX004695

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	26	483	1.60E-88

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71A26

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0020037	Molecular Function	heme binding
GO:0005506	Molecular Function	iron ion binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.640
	SRR5643514	five period of Gastrodia elata	0.000
	SRR5643515	five period of Gastrodia elata	0.150
	SRR5643524	five period of Gastrodia elata	0.000
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.170
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.190
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.540
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.040
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.100
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.970
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.350
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.960
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.03
	Mother_Gastro	Mother tuber of Gastrodia elata	0.02
	Mother_Juven	Mother tuber of Juvenile	0.09