Detail information of GWHGAAEX004706/evm.TU.scaffold_151.118
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2288 | 4.00E-167 | Galactosyltransferases |
| nr | gi|743874199|ref|XP_010907015.1| | 0 | PREDICTED: probable beta-1,3-galactosyltransferase 9 [Elaeis guineensis] |
| Swissprot | tr|Q94A05|B3GTA_ARATH | 1.00E-167 | Probable beta-1,3-galactosyltransferase 10 |
| trEMBL | tr|M0TT73|M0TT73_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P24200_001} |
| TAIR | AT4G32120 | 4.00E-167 | Galactosyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000155 | 2435468 | 2461600 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004706
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13334.5 | DUF4094 | 35 | 113 | 4.30E-06 |
| PF01762.20 | Galactosyl_T | 143 | 332 | 1.80E-31 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008378 | Molecular Function | galactosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 52.110 |
| SRR2545915 | Juvenile tuber | 43.640 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 27.480 |
| SRR5643514 | five period of Gastrodia elata | 31.430 | |
| SRR5643515 | five period of Gastrodia elata | 29.330 | |
| SRR5643524 | five period of Gastrodia elata | 28.920 | |
| SRR5643525 | five period of Gastrodia elata | 31.980 | |
| SRR5643528 | five period of Gastrodia elata | 28.310 | |
| SRR5643658 | five period of Gastrodia elata | 32.520 | |
| SRR5643659 | five period of Gastrodia elata | 34.200 | |
| SRR5643660 | five period of Gastrodia elata | 34.780 | |
| SRR5643661 | five period of Gastrodia elata | 34.660 | |
| SRR5643662 | five period of Gastrodia elata | 32.020 | |
| SRR5643663 | five period of Gastrodia elata | 36.760 | |
| SRR5643664 | five period of Gastrodia elata | 36.640 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.670 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 30.170 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 29.560 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 38.930 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 32.500 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 35.440 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 31.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 28.950 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.270 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.900 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 31.900 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 31.900 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 29.44 |
| Juven | Juvenile tuber | 34.78 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 28.45 | |
| Mother_Juven | Mother tuber of Juvenile | 29.48 |