Detail information of GWHGAAEX004716/evm.TU.scaffold_152.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|347756711|ref|YP_004864274.1|3.00E-20protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
KOGKOG11871.00E-107Serine/threonine protein kinase
nrgi|672117795|ref|XP_008782087.1|9.04E-179PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Phoenix dactylifera]
Swissprottr|Q9LSC2|Y3589_ARATH2.00E-106PTI1-like tyrosine-protein kinase At3g15890
trEMBLtr|K4CBD2|K4CBD2_SOLLC1.00E-174Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc07g006610.2.1}
TAIRAT1G525401.00E-107Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000161237676240900-
Transcript Sequence

Network for GWHGAAEX004716

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase473133.20E-41
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-XV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.880
SRR2545915Juvenile tuber6.700
SRP108465SRR5643513five period of Gastrodia elata17.900
SRR5643514five period of Gastrodia elata8.570
SRR5643515five period of Gastrodia elata10.680
SRR5643524five period of Gastrodia elata9.110
SRR5643525five period of Gastrodia elata21.510
SRR5643528five period of Gastrodia elata13.500
SRR5643658five period of Gastrodia elata11.720
SRR5643659five period of Gastrodia elata10.230
SRR5643660five period of Gastrodia elata10.340
SRR5643661five period of Gastrodia elata9.920
SRR5643662five period of Gastrodia elata15.050
SRR5643663five period of Gastrodia elata14.240
SRR5643664five period of Gastrodia elata13.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.200
SRR6049655Rhizomagastrodiae_C368-T10_good_113.020
SRR6049656Rhizomagastrodiae_C368-T07_good_113.430
SRR6049657Rhizomagastrodiae_C368-T07_good_111.040
SRR6049658Rhizomagastrodiae_C368-T04_good_113.890
SRR6049659Rhizomagastrodiae_C368-T04_good_110.350
SRR6049660Rhizomagastrodiae_C368-T01_good_18.590
SRR6049661Rhizomagastrodiae_C368-T04_good_111.930
SRR6049662Rhizomagastrodiae_C368-T01_good_19.550
SRR6049663Rhizomagastrodiae_C368-T01_good_113.260
SRR6049664Rhizomagastrodiae_C368-T10_good_118.780
SRR6049665Rhizomagastrodiae_C368-T10_good_118.780
SRP279888GastroGastrodia elata tuber 8.26
JuvenJuvenile tuber7.98
Mother_GastroMother tuber of Gastrodia elata 20.18
Mother_JuvenMother tuber of Juvenile 22.77