Detail information of GWHGAAEX004736/evm.TU.scaffold_152.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|667635869|ref|XP_008075217.1|3.01E-07hypothetical protein VCUG_02204 [Vavraia culicis subsp. floridensis]
TAIRCE042672.00E-06Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000161793319797127-
Transcript Sequence

Network for GWHGAAEX004736

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13126PABPC RNA transport map03013
mRNA surveillance pathwaymap03015
RNA degradationmap03018

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.060
SRR2545915Juvenile tuber2.320
SRP108465SRR5643513five period of Gastrodia elata1.760
SRR5643514five period of Gastrodia elata1.750
SRR5643515five period of Gastrodia elata1.820
SRR5643524five period of Gastrodia elata2.100
SRR5643525five period of Gastrodia elata1.080
SRR5643528five period of Gastrodia elata1.640
SRR5643658five period of Gastrodia elata1.340
SRR5643659five period of Gastrodia elata3.190
SRR5643660five period of Gastrodia elata2.550
SRR5643661five period of Gastrodia elata1.770
SRR5643662five period of Gastrodia elata1.970
SRR5643663five period of Gastrodia elata1.510
SRR5643664five period of Gastrodia elata2.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.580
SRR6049655Rhizomagastrodiae_C368-T10_good_12.150
SRR6049656Rhizomagastrodiae_C368-T07_good_10.520
SRR6049657Rhizomagastrodiae_C368-T07_good_11.330
SRR6049658Rhizomagastrodiae_C368-T04_good_10.440
SRR6049659Rhizomagastrodiae_C368-T04_good_10.130
SRR6049660Rhizomagastrodiae_C368-T01_good_10.340
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.350
SRR6049663Rhizomagastrodiae_C368-T01_good_10.090
SRR6049664Rhizomagastrodiae_C368-T10_good_11.280
SRR6049665Rhizomagastrodiae_C368-T10_good_11.280
SRP279888GastroGastrodia elata tuber 0.61
JuvenJuvenile tuber0.70
Mother_GastroMother tuber of Gastrodia elata 0.68
Mother_JuvenMother tuber of Juvenile 0.51