Detail information of GWHGAAEX004746/evm.TU.scaffold_152.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672119505|ref|XP_008782991.1|0PREDICTED: glucan endo-1,3-beta-glucosidase 5 [Phoenix dactylifera]
Swissprottr|Q93Z08|E136_ARATH6.00E-152Glucan endo-1,3-beta-glucosidase 6 (Precursor)
trEMBLtr|V4UB42|V4UB42_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR63227.1}
TAIRAT4G171800O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001619947641007381+
Transcript Sequence

Network for GWHGAAEX004746

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17283461.80E-67
PF07983.12X83654332.30E-15
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.370
SRR2545915Juvenile tuber5.840
SRP108465SRR5643513five period of Gastrodia elata14.040
SRR5643514five period of Gastrodia elata12.740
SRR5643515five period of Gastrodia elata15.690
SRR5643524five period of Gastrodia elata11.690
SRR5643525five period of Gastrodia elata20.380
SRR5643528five period of Gastrodia elata18.360
SRR5643658five period of Gastrodia elata23.130
SRR5643659five period of Gastrodia elata13.710
SRR5643660five period of Gastrodia elata11.530
SRR5643661five period of Gastrodia elata13.070
SRR5643662five period of Gastrodia elata15.210
SRR5643663five period of Gastrodia elata13.880
SRR5643664five period of Gastrodia elata13.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.080
SRR6049655Rhizomagastrodiae_C368-T10_good_111.210
SRR6049656Rhizomagastrodiae_C368-T07_good_112.200
SRR6049657Rhizomagastrodiae_C368-T07_good_19.580
SRR6049658Rhizomagastrodiae_C368-T04_good_17.930
SRR6049659Rhizomagastrodiae_C368-T04_good_15.310
SRR6049660Rhizomagastrodiae_C368-T01_good_110.810
SRR6049661Rhizomagastrodiae_C368-T04_good_110.360
SRR6049662Rhizomagastrodiae_C368-T01_good_114.110
SRR6049663Rhizomagastrodiae_C368-T01_good_110.940
SRR6049664Rhizomagastrodiae_C368-T10_good_113.900
SRR6049665Rhizomagastrodiae_C368-T10_good_113.900
SRP279888GastroGastrodia elata tuber 9.56
JuvenJuvenile tuber6.15
Mother_GastroMother tuber of Gastrodia elata 8.97
Mother_JuvenMother tuber of Juvenile 4.93