Detail information of GWHGAAEX004751/evm.TU.scaffold_152.56
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15901596|ref|NP_346200.1| | 8.00E-09 | glycosyl transferase family protein [Streptococcus pneumoniae TIGR4] |
| nr | gi|672141800|ref|XP_008794740.1| | 0 | PREDICTED: probable galacturonosyltransferase 4 isoform X4 [Phoenix dactylifera] |
| Swissprot | tr|Q93ZX7|GAUT4_ARATH | 0 | Probable galacturonosyltransferase 4 |
| trEMBL | tr|A0A022R1G5|A0A022R1G5_ERYGU | 0 | Uncharacterized protein {ECO:0000313|EMBL:EYU33824.1} |
| TAIR | AT5G47780 | 0 | galacturonosyltransferase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000161 | 1200420 | 1224952 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004751
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01501.19 | Glyco_transf_8 | 304 | 615 | 1.30E-91 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT8 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13648 | GAUT | Metabolic pathways | map01100 |
| Amino sugar and nucleotide sugar metabolism | map00520 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016757 | Molecular Function | transferase activity, transferring glycosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.520 |
| SRR2545915 | Juvenile tuber | 16.720 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 25.500 |
| SRR5643514 | five period of Gastrodia elata | 24.620 | |
| SRR5643515 | five period of Gastrodia elata | 26.190 | |
| SRR5643524 | five period of Gastrodia elata | 21.530 | |
| SRR5643525 | five period of Gastrodia elata | 25.990 | |
| SRR5643528 | five period of Gastrodia elata | 20.130 | |
| SRR5643658 | five period of Gastrodia elata | 21.160 | |
| SRR5643659 | five period of Gastrodia elata | 31.910 | |
| SRR5643660 | five period of Gastrodia elata | 22.790 | |
| SRR5643661 | five period of Gastrodia elata | 36.800 | |
| SRR5643662 | five period of Gastrodia elata | 30.890 | |
| SRR5643663 | five period of Gastrodia elata | 44.740 | |
| SRR5643664 | five period of Gastrodia elata | 36.260 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 29.670 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 30.870 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 29.380 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.430 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.520 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 21.100 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 22.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.600 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 23.660 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 32.600 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 32.600 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 38.69 |
| Juven | Juvenile tuber | 28.42 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 27.80 | |
| Mother_Juven | Mother tuber of Juvenile | 33.72 |