Detail information of GWHGAAEX004752/evm.TU.scaffold_152.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16573.00E-64CCAAT-binding factor, subunit C (HAP5)
nrgi|695010456|ref|XP_009391901.1|4.23E-86PREDICTED: nuclear transcription factor Y subunit C-2-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8LCG7|NFYC2_ARATH1.00E-64Nuclear transcription factor Y subunit C-2
trEMBLtr|D6MKI8|D6MKI8_9ASPA5.00E-84Transcription factor {ECO:0000313|EMBL:ADG58035.1}
TAIRAT1G561703.00E-64nuclear factor Y, subunit C2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016113283711329545+
Transcript Sequence

Network for GWHGAAEX004752

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.22CBFD_NFYB_HMF611241.60E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YC

KEGG pathway

KO Enzyme pathway mapID
K08066NFYC Antigen processing and presentation map04612

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms62.070
SRR2545915Juvenile tuber68.590
SRP108465SRR5643513five period of Gastrodia elata93.150
SRR5643514five period of Gastrodia elata105.030
SRR5643515five period of Gastrodia elata81.990
SRR5643524five period of Gastrodia elata97.290
SRR5643525five period of Gastrodia elata126.640
SRR5643528five period of Gastrodia elata107.280
SRR5643658five period of Gastrodia elata100.750
SRR5643659five period of Gastrodia elata124.720
SRR5643660five period of Gastrodia elata129.270
SRR5643661five period of Gastrodia elata165.100
SRR5643662five period of Gastrodia elata174.110
SRR5643663five period of Gastrodia elata127.790
SRR5643664five period of Gastrodia elata181.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1103.970
SRR6049655Rhizomagastrodiae_C368-T10_good_1112.420
SRR6049656Rhizomagastrodiae_C368-T07_good_1122.690
SRR6049657Rhizomagastrodiae_C368-T07_good_1121.230
SRR6049658Rhizomagastrodiae_C368-T04_good_1125.930
SRR6049659Rhizomagastrodiae_C368-T04_good_1145.330
SRR6049660Rhizomagastrodiae_C368-T01_good_1120.690
SRR6049661Rhizomagastrodiae_C368-T04_good_1133.040
SRR6049662Rhizomagastrodiae_C368-T01_good_1145.610
SRR6049663Rhizomagastrodiae_C368-T01_good_1150.220
SRR6049664Rhizomagastrodiae_C368-T10_good_1120.150
SRR6049665Rhizomagastrodiae_C368-T10_good_1120.150
SRP279888GastroGastrodia elata tuber 195.19
JuvenJuvenile tuber113.04
Mother_GastroMother tuber of Gastrodia elata 101.27
Mother_JuvenMother tuber of Juvenile 68.19