Detail information of GWHGAAEX004755/evm.TU.scaffold_152.61
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440682064|ref|YP_007156859.1| | 8.00E-12 | Alg9 family protein mannosyltransferase [Anabaena cylindrica PCC 7122] |
| KOG | KOG1771 | 0 | GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis |
| nr | gi|672170334|ref|XP_008805223.1| | 0 | PREDICTED: GPI mannosyltransferase 3 isoform X2 [Phoenix dactylifera] |
| trEMBL | tr|M0SGA2|M0SGA2_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P20360_001} |
| TAIR | AT5G14850 | 0 | Alg9-like mannosyltransferase family |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000161 | 1370081 | 1380233 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004755
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03901.16 | Glyco_transf_22 | 44 | 448 | 1.00E-112 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT22 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05286 | PIGB | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016757 | Molecular Function | transferase activity, transferring glycosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 60.300 |
| SRR2545915 | Juvenile tuber | 54.760 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.310 |
| SRR5643514 | five period of Gastrodia elata | 16.600 | |
| SRR5643515 | five period of Gastrodia elata | 16.900 | |
| SRR5643524 | five period of Gastrodia elata | 18.600 | |
| SRR5643525 | five period of Gastrodia elata | 24.310 | |
| SRR5643528 | five period of Gastrodia elata | 18.740 | |
| SRR5643658 | five period of Gastrodia elata | 29.020 | |
| SRR5643659 | five period of Gastrodia elata | 26.330 | |
| SRR5643660 | five period of Gastrodia elata | 27.410 | |
| SRR5643661 | five period of Gastrodia elata | 23.820 | |
| SRR5643662 | five period of Gastrodia elata | 20.510 | |
| SRR5643663 | five period of Gastrodia elata | 29.340 | |
| SRR5643664 | five period of Gastrodia elata | 23.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.520 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.200 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 24.060 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 37.350 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.770 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.930 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.510 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.820 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.710 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.020 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.020 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 30.08 |
| Juven | Juvenile tuber | 39.16 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.81 | |
| Mother_Juven | Mother tuber of Juvenile | 40.43 |