Detail information of GWHGAAEX004766/evm.TU.scaffold_152.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434395205|ref|YP_007130152.1|0phosphoglycerate kinase [Gloeocapsa sp. PCC 7428]
KOGKOG136703-phosphoglycerate kinase
nrgi|672171816|ref|XP_008805983.1|0PREDICTED: phosphoglycerate kinase, cytosolic-like [Phoenix dactylifera]
Swissprottr|Q42961|PGKH_TOBAC0Phosphoglycerate kinase, chloroplastic (Precursor)
trEMBLtr|M0T2W8|M0T2W8_MUSAM0Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}
TAIRAT3G127800phosphoglycerate kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016120388052054743-
Transcript Sequence

Network for GWHGAAEX004766

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00162.18PGK1224991.70E-157
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00927PGK, pgk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066

Gene Ontology

GO term OntologyName
GO:0006096Biological Processglycolytic process
GO:0004618Molecular Functionphosphoglycerate kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.440
SRR2545915Juvenile tuber10.820
SRP108465SRR5643513five period of Gastrodia elata11.570
SRR5643514five period of Gastrodia elata12.550
SRR5643515five period of Gastrodia elata11.870
SRR5643524five period of Gastrodia elata13.560
SRR5643525five period of Gastrodia elata7.930
SRR5643528five period of Gastrodia elata6.260
SRR5643658five period of Gastrodia elata7.580
SRR5643659five period of Gastrodia elata15.630
SRR5643660five period of Gastrodia elata15.020
SRR5643661five period of Gastrodia elata15.760
SRR5643662five period of Gastrodia elata16.050
SRR5643663five period of Gastrodia elata16.670
SRR5643664five period of Gastrodia elata14.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.330
SRR6049655Rhizomagastrodiae_C368-T10_good_18.510
SRR6049656Rhizomagastrodiae_C368-T07_good_111.090
SRR6049657Rhizomagastrodiae_C368-T07_good_19.670
SRR6049658Rhizomagastrodiae_C368-T04_good_110.060
SRR6049659Rhizomagastrodiae_C368-T04_good_18.830
SRR6049660Rhizomagastrodiae_C368-T01_good_19.650
SRR6049661Rhizomagastrodiae_C368-T04_good_111.010
SRR6049662Rhizomagastrodiae_C368-T01_good_114.700
SRR6049663Rhizomagastrodiae_C368-T01_good_111.280
SRR6049664Rhizomagastrodiae_C368-T10_good_112.240
SRR6049665Rhizomagastrodiae_C368-T10_good_112.240
SRP279888GastroGastrodia elata tuber 16.19
JuvenJuvenile tuber20.23
Mother_GastroMother tuber of Gastrodia elata 8.22
Mother_JuvenMother tuber of Juvenile 13.35