Detail information of GWHGAAEX004767/evm.TU.scaffold_152.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|193214256|ref|YP_001995455.1|3.00E-67triosephosphate isomerase [Chloroherpeton thalassium ATCC 35110]
KOGKOG16435.00E-146Triosephosphate isomerase
nrgi|743780701|ref|XP_010920579.1|3.22E-152PREDICTED: triosephosphate isomerase, cytosolic-like [Elaeis guineensis]
Swissprottr|P12863|TPIS_MAIZE1.00E-150Triosephosphate isomerase, cytosolic
trEMBLtr|B3TLL4|B3TLL4_ELAGV1.00E-152Triosephosphate isomerase {ECO:0000256|RuleBase:RU000517}
TAIRAT3G554405.00E-146triosephosphate isomerase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016121105102135068+
Transcript Sequence

Network for GWHGAAEX004767

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00121.17TIM62453.10E-85
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01803TPI, tpiA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Fructose and mannose metabolismmap00051
Inositol phosphate metabolismmap00562
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0006096Biological Processglycolytic process
GO:0003824Molecular Functioncatalytic activity
GO:0004807Molecular Functiontriose-phosphate isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms190.760
SRR2545915Juvenile tuber201.870
SRP108465SRR5643513five period of Gastrodia elata515.260
SRR5643514five period of Gastrodia elata681.390
SRR5643515five period of Gastrodia elata544.540
SRR5643524five period of Gastrodia elata679.870
SRR5643525five period of Gastrodia elata523.590
SRR5643528five period of Gastrodia elata571.330
SRR5643658five period of Gastrodia elata447.300
SRR5643659five period of Gastrodia elata324.400
SRR5643660five period of Gastrodia elata347.360
SRR5643661five period of Gastrodia elata346.520
SRR5643662five period of Gastrodia elata310.610
SRR5643663five period of Gastrodia elata316.920
SRR5643664five period of Gastrodia elata315.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1390.290
SRR6049655Rhizomagastrodiae_C368-T10_good_1394.200
SRR6049656Rhizomagastrodiae_C368-T07_good_1469.730
SRR6049657Rhizomagastrodiae_C368-T07_good_1314.710
SRR6049658Rhizomagastrodiae_C368-T04_good_1361.140
SRR6049659Rhizomagastrodiae_C368-T04_good_1320.330
SRR6049660Rhizomagastrodiae_C368-T01_good_1344.750
SRR6049661Rhizomagastrodiae_C368-T04_good_1328.950
SRR6049662Rhizomagastrodiae_C368-T01_good_1573.810
SRR6049663Rhizomagastrodiae_C368-T01_good_1506.970
SRR6049664Rhizomagastrodiae_C368-T10_good_1666.680
SRR6049665Rhizomagastrodiae_C368-T10_good_1666.680
SRP279888GastroGastrodia elata tuber 403.49
JuvenJuvenile tuber595.52
Mother_GastroMother tuber of Gastrodia elata 545.65
Mother_JuvenMother tuber of Juvenile 558.77