Detail information of GWHGAAEX004768/evm.TU.scaffold_152.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225449479|ref|XP_002283358.1|3.82E-155PREDICTED: expansin-A4 [Vitis vinifera]
Swissprottr|O48818|EXPA4_ARATH5.00E-149Expansin-A4 (Precursor)
trEMBLtr|D7TLS5|D7TLS5_VITVI1.00E-155Putative uncharacterized protein {ECO:0000313|EMBL:CBI31662.3}
TAIRAT2G397002.00E-148expansin A4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016121351742138608-
Transcript Sequence

Network for GWHGAAEX004768

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03330.17DPBB_1671523.10E-21
PF01357.20Pollen_allerg_11642412.30E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009664Biological Processplant-type cell wall organization
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.770
SRR2545915Juvenile tuber20.160
SRP108465SRR5643513five period of Gastrodia elata32.670
SRR5643514five period of Gastrodia elata27.300
SRR5643515five period of Gastrodia elata27.260
SRR5643524five period of Gastrodia elata16.690
SRR5643525five period of Gastrodia elata5.140
SRR5643528five period of Gastrodia elata3.660
SRR5643658five period of Gastrodia elata5.040
SRR5643659five period of Gastrodia elata31.260
SRR5643660five period of Gastrodia elata22.270
SRR5643661five period of Gastrodia elata30.410
SRR5643662five period of Gastrodia elata10.110
SRR5643663five period of Gastrodia elata12.200
SRR5643664five period of Gastrodia elata12.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_178.720
SRR6049655Rhizomagastrodiae_C368-T10_good_175.520
SRR6049656Rhizomagastrodiae_C368-T07_good_199.340
SRR6049657Rhizomagastrodiae_C368-T07_good_157.720
SRR6049658Rhizomagastrodiae_C368-T04_good_141.920
SRR6049659Rhizomagastrodiae_C368-T04_good_126.430
SRR6049660Rhizomagastrodiae_C368-T01_good_152.990
SRR6049661Rhizomagastrodiae_C368-T04_good_163.670
SRR6049662Rhizomagastrodiae_C368-T01_good_181.600
SRR6049663Rhizomagastrodiae_C368-T01_good_158.820
SRR6049664Rhizomagastrodiae_C368-T10_good_168.600
SRR6049665Rhizomagastrodiae_C368-T10_good_168.600
SRP279888GastroGastrodia elata tuber 3.71
JuvenJuvenile tuber13.01
Mother_GastroMother tuber of Gastrodia elata 0.91
Mother_JuvenMother tuber of Juvenile 1.59