Gene detail

Detail information of GWHGAAEX004771/evm.TU.scaffold_152.84

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG3058	2.00E-148	Uncharacterized conserved protein
nr	gi\|695065474\|ref\|XP_009421326.1\|	9.86E-176	PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q5N7A7\|IPCS_ORYSJ	5.00E-163	Phosphatidylinositol:ceramide inositolphosphotransferase
trEMBL	tr\|M0RI03\|M0RI03_MUSAM	4.00E-176	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P13770_001}
TAIR	AT3G54020	2.00E-148	Arabidopsis Inositol phosphorylceramide synthase 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000161	2216736	2230651	-

Transcript Sequence
>GWHTAAEX004771 TTTTTGGGTTTTACCAACGTAAAAACCCTTATTTTCGAATTTGGAGAATTTCGTTTCTTGTAAGAACGCACGCCGCAGAGGGCAAAATAAAATAGAAGTTTTTTTTTTTATCTTTTTTGAATATCTCTCTGTCTGCTCTGCTTCCAAGCGGCGTGATTGCCAGAAATCGCCGCTAGCACAATTCAAAGCATTTTAAACTGCAGGAGAACATTGAAGATGCTTTAAATTAAGAAGAAAATCAACCAATTCAGCCTCGCTGAGCCGTGTTCGTCCCCCGTCAGATTGGTCGCCGGAGCAGCGATTTGGGGTTTCTGATTGGGTCTTCGGGGACTTTTGACTTTGATGTGAACAAGGATGACTGGAGGAGCAGACTGCTGCTGAAATTGCATGGAATTTTTGCCGTGGACTAGTACAATGGTTTATCTTACTCGTGAAGCTTCCAAGTTATGGAGAAAGATTTGTTTGGAGATATCTGTGGAGATTCATCTTCTGGCTGAGAAGTGGAAGTTTCTGCTTTCTGCTCTCATATTTCAGTATATTCATGGTTTATCTGCTCGTGGGGTTCACTATTTGCACCAACCGGGACCAGTTCTTAAAGATATTGGATTCATGATTTTTCCGGAGCTTGGGGCTGAGAGGGGTTACTATAGCGAGACTTTGTTCACTTTTATCTTTTTCTCCTTTATATTGTGGACATTTTACCCGTTCGTATATCATAGCAAGCGTTTTTACACGGTTCTGCTATGGCTAAGGGTGTTCGCTTGTCTTATTGTATGCCAGATTCTACGGATTGTAACATTCTATTCCACTATACTCCCTGGTTCTAACTATCACTGCCGTGAGGGCTCACCCCTTGCCAGTCTGCCGCCTCCCGACAACATATTTGAAGTGCTCTTTATTAATTTTCCCCGAGGAGTAATTTATGGATGTGGTGATTTGATATTCTCTTCTCACATGATTTTTACGCTGGTTTTTGTCAGAACATATCATAAGTATGGATCTAAGAGGTTTGTGAAGATGCTTGCGTGGCTAATGGTTATCTTGCAGAGTGTGCTGATAATTGCTTCTAGGAAACATTACACTGTTGATGTGGTTGTGGCATGGTATACGGTAAATCTGGTGATGTTTGTGGTTGATTCCAAGCTGCCAGAAATGCCAGACCGTTCTGGTGGAATTCAGCCACTGCTTCCTCTGAACGCAAAGGAAAAAGAGAGCAAATCCAGAGAAGATAATCATAATCTCTTGAATGGGAGTTCTGTTGAAGTCACTGATTGGAGGCAAAGAATGCAAGCCAATGGGAAGAATGTGCAGAATGGCAATCACGACCACGAGTTGGCGCTAAGTTAAGAAGCGCAGATGGAAGGAGTCTATTTATTTTTAAATGTAAGGAGTACAGATAATATTATTATCTGATTGTTCTCCTTGTCGCTCTCAGGAGGCCGAAGGCCTCTGTCTGCTGCTCTCTGCATTCATTAGCTCTTTCCAGTCTCTTACAATCAATTCTTAAATATTTATTAATTAACAGCACACATTATTTAGATTTTTTCGAGTTATTAAAGAATTTTTTTCTGGTATTATA

Network for GWHGAAEX004771

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14360.5	PAP2_C	180	248	2.10E-23

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	58.840
SRP064423	SRR2545915	Juvenile tuber	58.060
SRP108465	SRR5643513	five period of Gastrodia elata	58.530
	SRR5643514	five period of Gastrodia elata	48.770
	SRR5643515	five period of Gastrodia elata	57.400
	SRR5643524	five period of Gastrodia elata	57.020
	SRR5643525	five period of Gastrodia elata	78.670
	SRR5643528	five period of Gastrodia elata	75.470
	SRR5643658	five period of Gastrodia elata	69.490
	SRR5643659	five period of Gastrodia elata	51.850
	SRR5643660	five period of Gastrodia elata	61.590
	SRR5643661	five period of Gastrodia elata	63.340
	SRR5643662	five period of Gastrodia elata	67.410
	SRR5643663	five period of Gastrodia elata	54.570
	SRR5643664	five period of Gastrodia elata	65.800
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	40.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	28.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	45.300
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	43.200
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	40.970
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	39.310
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	36.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.500
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	30.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	36.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	36.130
SRP279888	Gastro	Gastrodia elata tuber	58.96
	Juven	Juvenile tuber	68.24
	Mother_Gastro	Mother tuber of Gastrodia elata	85.29
	Mother_Juven	Mother tuber of Juvenile	80.91