Gene detail

Detail information of GWHGAAEX004772/evm.TU.scaffold_152.85

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672124190\|ref\|XP_008785469.1\|	2.85E-55	PREDICTED: uncharacterized protein LOC103704097 [Phoenix dactylifera]
trEMBL	tr\|C5WQ36\|C5WQ36_SORBI	9.00E-47	Putative uncharacterized protein Sb01g039960 {ECO:0000313\|EMBL:EER92498.1}
TAIR	AT2G29510	5.00E-30	Protein of unknown function (DUF3527)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000161	2282383	2286810	+

Transcript Sequence
>GWHTAAEX004772 AACGCGGGGGCCGCCTTCAATCCCCTAAAGCCAAAATCCCGCATTCTTCCAAAATCGAAAGCTGATCTGTTCCCGTCTTTGTCGCTCGCACTGTTTTTCTCTCCCTTCAGTTCTCATTTCCTCCCTATTCGTCTCCTGAGACTGCGTAGCTACGTTTTCTTCTTCCATTCGTGCCCATCAGTTTCGAGAATCAGGGTTTATTCAATTGGGGGCGTCAAAAAGCTGCAGATCTTTAGAAGGGACGAAGATTTGTATTTATTTTTACTTTGATCATGTCGTCAATCAAGGAAAATAGGAATCGGCACATGAAGAAGTAGCTTTTCCATGTTATGTTTTTCCCACCACTAAATGAGCTCAGAGCAACGGTTGGATCTTCGATTCCAAATGCATTCAGAGGATGCTGGAATTGGCGTATTTGAGCAGCATTCATGGCCTAGAAGGAAGTCTTCCGAGGCAGAAGAATTGACCAGATACGTCATTCAGAAAAAGATGCTGAATGTCGGCGTTCTCGATTTGAGGCGTCTGCAGAAGCCCGCCGATCTTGAGAAACGGATATCCTCTCATAATTCAGGAATCCACGCAAATTCCGCGTGTTTAGAAGAAAAGGATCAAAGGAAAAGCGGGCGAAAAAGTTCAAGCAAACCCATTATTCAGCCCCCCCAAGATGTTTGCAGAAATGCCGGGTCCGATGATGGCCTAGAGAAGCTGAAAACCAGTATTGGGAGGGATGGGGATAGGCTTAAAGATAGCAGGAAGCATCTCGAGAAAATAATTGCAAGAAGTATTCGCGACTTGGACGCCGCAGCATCGGTCGATCGCCAAAGGAAAATAACAGGAAATTTTCCGACTCCTAAGACCCATACTAACGGCGATGCTTCTGTCGGAAGACGGAAAGAATCGTTACCGATTGTTCTTCCCAGAGTTGATTTTCCGAATGAGGCAGCTTCAAGAAGCTCATCTTCATCTGCGCATTCGGATCCCAAAAGGCAGGCTCTTCTGAAGCTCTGCTGGAAGAATGGGCAGCCTCTGCTTATGTTCTCATCCGGTGATGACAGCATTCTAGTGGCAATGCTGCACCAGAGAGGCAACCCAGGCATGAGCATCTGCGACTGCGTCTACGAAATACACACGGCAAGAGAATTGGAGGCGAAGAAGAGAAACGGCGCCTGGCTGAGCCAAGGAGCGAAGGGCAAGAAGCCCGAATTCTGCTGCAAGTACATTGCGGAACTGATTGTTTCGAGTTCCGAGAGGGTGAGCTTCGATCTTACTCACCGGTCCTTGGTGAGAGAGCTCGTTCTTCTGGGCGATGAATTGGCGCTGTCGGCGGCACCAAATCGCGAAGACGCGCCTCAGGATTCGTCGAACACCGAACTCGCTGCCATTGTTGTGGAATCTTCCTCGCAACAAAGGGGCGATCCACGCATTGTGGCCGTCCTTCCCAGAGGCGTTCATGGCTTCTCCAGCACGAGAGAGCACTCCAAGCTGATAGAGAGATGGGAGTCAGGGGGCGCCTGCGACTGTGGAGGCTGGGACGAAGGCTGCGCTCTCACCATTCTGACCAACAATTCCACTGAGGAAACAGCTAATGATGAAATCTGCGGACTTCATCTTTTCACAGAGGGCGATGCTAGAAAGGGAAAAGCTTCTTTCAGTTTGGTTACCTTTAAGGAAGATATGTTCACAGTAGAGTTCAAGGCCTCGCTTCCTTTGCTGCAGGCTTTTGCAATTTCAGTCGCCGTTCTGCACGATCGAAACTGTGGCGATGGTGCCATGGGAAATAATCACTACATTGGAGATGATAACTATGATGATCTTAGCTTTGAGAGCTGTTCATCTGGAATTCCTTTTTGAACCGTTTATATTTCTATATAAATAGATATATTTATGCACTAATATTTTTCCCAAAATTTCTCAGGACTTGTTAGGTTTGCTAACATTATTCATGGAATTGTTGGATGATTGAGAGGCAAATCAAAGCATCGTTTGTTTGGCTTTGTATCAATTCATTGATTAAATTTTGTGTATGCTGAGGGATATTAAGAGAAAATATTTAACTTAGGGTTGTTTGGTTTGTTGGGTTTTAAATAGTGTTGAGTATGTTTCAAATGTTTTGATGCTGTTTGAATGTTTGTAATGTTTTGTCAGCAAATCGTATATTATTGTTTGTCTTGATAACTTGCATATGCATGTATTTCTCTATCTATTTTCAGAGTACTGTTACAATGATAAAATAAGTATGAACGGTATGATAGATCTATGTGTAAATATATAATTGGTTG

Network for GWHGAAEX004772

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12043.7	DUF3527	341	467	1.00E-34

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	29.930
SRP064423	SRR2545915	Juvenile tuber	30.490
SRP108465	SRR5643513	five period of Gastrodia elata	34.280
	SRR5643514	five period of Gastrodia elata	38.820
	SRR5643515	five period of Gastrodia elata	40.260
	SRR5643524	five period of Gastrodia elata	37.890
	SRR5643525	five period of Gastrodia elata	51.470
	SRR5643528	five period of Gastrodia elata	45.820
	SRR5643658	five period of Gastrodia elata	49.680
	SRR5643659	five period of Gastrodia elata	41.610
	SRR5643660	five period of Gastrodia elata	40.140
	SRR5643661	five period of Gastrodia elata	40.060
	SRR5643662	five period of Gastrodia elata	42.490
	SRR5643663	five period of Gastrodia elata	38.520
	SRR5643664	five period of Gastrodia elata	48.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	50.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	42.390
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	57.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	42.530
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	45.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	46.320
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	61.060
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	48.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	48.210
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	69.750
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	61.930
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	61.930
SRP279888	Gastro	Gastrodia elata tuber	49.42
	Juven	Juvenile tuber	41.22
	Mother_Gastro	Mother tuber of Gastrodia elata	35.39
	Mother_Juven	Mother tuber of Juvenile	32.95