Detail information of GWHGAAEX004775/evm.TU.scaffold_152.87
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0752 | 3.00E-147 | Mitochondrial solute carrier protein |
| nr | gi|672182243|ref|XP_008811361.1| | 5.57E-170 | PREDICTED: mitochondrial substrate carrier family protein B-like [Phoenix dactylifera] |
| Swissprot | tr|O04619|ADNT1_ARATH | 1.00E-56 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|M0TLZ5|M0TLZ5_MUSAM | 6.00E-165 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P02430_001} |
| trEMBL | tr|M0TLZ5|M0TLZ5_MUSAM | 5.00E-21 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P02430_001} |
| TAIR | AT3G55640 | 3.00E-147 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000161 | 2319606 | 2356839 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004775
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 49 | 137 | 2.60E-18 |
| PF00153.26 | Mito_carr | 154 | 237 | 4.60E-23 |
| PF00153.26 | Mito_carr | 247 | 339 | 1.50E-24 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 29.920 |
| SRR2545915 | Juvenile tuber | 22.670 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.950 |
| SRR5643514 | five period of Gastrodia elata | 14.490 | |
| SRR5643515 | five period of Gastrodia elata | 11.290 | |
| SRR5643524 | five period of Gastrodia elata | 10.940 | |
| SRR5643525 | five period of Gastrodia elata | 6.240 | |
| SRR5643528 | five period of Gastrodia elata | 3.160 | |
| SRR5643658 | five period of Gastrodia elata | 2.680 | |
| SRR5643659 | five period of Gastrodia elata | 22.980 | |
| SRR5643660 | five period of Gastrodia elata | 24.140 | |
| SRR5643661 | five period of Gastrodia elata | 25.880 | |
| SRR5643662 | five period of Gastrodia elata | 22.890 | |
| SRR5643663 | five period of Gastrodia elata | 19.780 | |
| SRR5643664 | five period of Gastrodia elata | 23.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.630 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.940 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.690 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.770 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.950 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.570 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.210 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.870 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.550 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.430 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 17.380 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 17.380 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 28.99 |
| Juven | Juvenile tuber | 26.35 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.45 | |
| Mother_Juven | Mother tuber of Juvenile | 14.26 |