Detail information of GWHGAAEX004780/evm.TU.scaffold_153.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26620Magnesium transporters: CorA family
nrgi|672113421|ref|XP_008810857.1|0PREDICTED: magnesium transporter MRS2-1-like [Phoenix dactylifera]
Swissprottr|Q9S9N4|MRS21_ARATH0Magnesium transporter MRS2-1
trEMBLtr|M0TZZ5|M0TZZ5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P13370_001}
TAIRAT1G160100magnesium transporter 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000149232829262553+
Transcript Sequence

Network for GWHGAAEX004780

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01544.17CorA3004163.00E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0030001Biological Processmetal ion transport
GO:0046873Molecular Functionmetal ion transmembrane transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.810
SRR2545915Juvenile tuber6.160
SRP108465SRR5643513five period of Gastrodia elata9.310
SRR5643514five period of Gastrodia elata9.150
SRR5643515five period of Gastrodia elata10.580
SRR5643524five period of Gastrodia elata9.300
SRR5643525five period of Gastrodia elata16.380
SRR5643528five period of Gastrodia elata15.760
SRR5643658five period of Gastrodia elata16.050
SRR5643659five period of Gastrodia elata9.830
SRR5643660five period of Gastrodia elata8.960
SRR5643661five period of Gastrodia elata9.050
SRR5643662five period of Gastrodia elata11.020
SRR5643663five period of Gastrodia elata10.260
SRR5643664five period of Gastrodia elata8.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.690
SRR6049655Rhizomagastrodiae_C368-T10_good_111.830
SRR6049656Rhizomagastrodiae_C368-T07_good_110.420
SRR6049657Rhizomagastrodiae_C368-T07_good_18.640
SRR6049658Rhizomagastrodiae_C368-T04_good_110.220
SRR6049659Rhizomagastrodiae_C368-T04_good_19.770
SRR6049660Rhizomagastrodiae_C368-T01_good_19.590
SRR6049661Rhizomagastrodiae_C368-T04_good_110.820
SRR6049662Rhizomagastrodiae_C368-T01_good_111.760
SRR6049663Rhizomagastrodiae_C368-T01_good_111.000
SRR6049664Rhizomagastrodiae_C368-T10_good_111.860
SRR6049665Rhizomagastrodiae_C368-T10_good_111.860
SRP279888GastroGastrodia elata tuber 8.51
JuvenJuvenile tuber8.77
Mother_GastroMother tuber of Gastrodia elata 21.08
Mother_JuvenMother tuber of Juvenile 17.48