Detail information of GWHGAAEX004783/evm.TU.scaffold_153.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|206891175|ref|YP_002248577.1|3.00E-10DNA methylase domain-containing protein [Thermodesulfovibrio yellowstonii DSM 11347]
nrgi|308044389|ref|NP_001183616.1|1.55E-93hypothetical protein [Zea mays]
Swissprottr|P37707|B2_DAUCA7.00E-91B2 protein
trEMBLtr|C4J9B3|C4J9B3_MAIZE6.00E-94Uncharacterized protein {ECO:0000313|EMBL:ACR37763.1, ECO:0000313|EnsemblPlants:GRMZM5G860590_P01}
TAIRAT5G420508.00E-84DCD (Development and Cell Death) domain protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000149461142463634+
Transcript Sequence

Network for GWHGAAEX004783

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10539.8Dev_Cell_Death1793061.60E-39
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.400
SRR2545915Juvenile tuber9.990
SRP108465SRR5643513five period of Gastrodia elata19.590
SRR5643514five period of Gastrodia elata22.300
SRR5643515five period of Gastrodia elata62.070
SRR5643524five period of Gastrodia elata37.480
SRR5643525five period of Gastrodia elata25.170
SRR5643528five period of Gastrodia elata22.550
SRR5643658five period of Gastrodia elata3.840
SRR5643659five period of Gastrodia elata42.390
SRR5643660five period of Gastrodia elata30.190
SRR5643661five period of Gastrodia elata31.050
SRR5643662five period of Gastrodia elata48.190
SRR5643663five period of Gastrodia elata31.650
SRR5643664five period of Gastrodia elata195.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.040
SRR6049655Rhizomagastrodiae_C368-T10_good_14.930
SRR6049656Rhizomagastrodiae_C368-T07_good_15.120
SRR6049657Rhizomagastrodiae_C368-T07_good_16.710
SRR6049658Rhizomagastrodiae_C368-T04_good_14.020
SRR6049659Rhizomagastrodiae_C368-T04_good_15.340
SRR6049660Rhizomagastrodiae_C368-T01_good_18.760
SRR6049661Rhizomagastrodiae_C368-T04_good_14.930
SRR6049662Rhizomagastrodiae_C368-T01_good_110.760
SRR6049663Rhizomagastrodiae_C368-T01_good_117.580
SRR6049664Rhizomagastrodiae_C368-T10_good_14.560
SRR6049665Rhizomagastrodiae_C368-T10_good_14.560
SRP279888GastroGastrodia elata tuber 21.40
JuvenJuvenile tuber6.46
Mother_GastroMother tuber of Gastrodia elata 207.28
Mother_JuvenMother tuber of Juvenile 148.05