Detail information of GWHGAAEX004786/evm.TU.scaffold_153.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|338734238|ref|YP_004672711.1|8.00E-45cyclase family protein [Simkania negevensis Z]
nrgi|475541152|gb|EMT09729.1|2.37E-130hypothetical protein F775_09450 [Aegilops tauschii]
trEMBLtr|W5FU22|W5FU22_WHEAT8.00E-131Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_5DL_62A611DA9.1}
TAIRAT1G445425.00E-103Cyclase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000149653579709397+
Transcript Sequence

Network for GWHGAAEX004786

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04199.12Cyclase702255.40E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0019441Biological Processtryptophan catabolic process to kynurenine
GO:0004061Molecular Functionarylformamidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms143.410
SRR2545915Juvenile tuber226.670
SRP108465SRR5643513five period of Gastrodia elata154.050
SRR5643514five period of Gastrodia elata176.450
SRR5643515five period of Gastrodia elata166.150
SRR5643524five period of Gastrodia elata179.130
SRR5643525five period of Gastrodia elata143.850
SRR5643528five period of Gastrodia elata166.750
SRR5643658five period of Gastrodia elata183.270
SRR5643659five period of Gastrodia elata151.910
SRR5643660five period of Gastrodia elata152.010
SRR5643661five period of Gastrodia elata161.800
SRR5643662five period of Gastrodia elata130.470
SRR5643663five period of Gastrodia elata147.060
SRR5643664five period of Gastrodia elata141.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1245.240
SRR6049655Rhizomagastrodiae_C368-T10_good_1192.180
SRR6049656Rhizomagastrodiae_C368-T07_good_1319.110
SRR6049657Rhizomagastrodiae_C368-T07_good_1234.390
SRR6049658Rhizomagastrodiae_C368-T04_good_1241.290
SRR6049659Rhizomagastrodiae_C368-T04_good_1213.440
SRR6049660Rhizomagastrodiae_C368-T01_good_1185.740
SRR6049661Rhizomagastrodiae_C368-T04_good_1288.450
SRR6049662Rhizomagastrodiae_C368-T01_good_1237.370
SRR6049663Rhizomagastrodiae_C368-T01_good_1206.700
SRR6049664Rhizomagastrodiae_C368-T10_good_1259.740
SRR6049665Rhizomagastrodiae_C368-T10_good_1259.740
SRP279888GastroGastrodia elata tuber 153.86
JuvenJuvenile tuber87.84
Mother_GastroMother tuber of Gastrodia elata 130.22
Mother_JuvenMother tuber of Juvenile 138.66