Detail information of GWHGAAEX004789/evm.TU.scaffold_153.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557694469|ref|YP_008797523.1|2.00E-41protein phosphatase [Candidatus Caldiarchaeum subterraneum]
KOGKOG03746.00E-175Serine/threonine specific protein phosphatase PP1, catalytic subunit
nrgi|743820016|ref|XP_010931675.1|0PREDICTED: serine/threonine-protein phosphatase PP1-like [Elaeis guineensis]
Swissprottr|O82734|PP18_ARATH4.00E-175Serine/threonine-protein phosphatase PP1 isozyme 8
trEMBLtr|F6I4Q1|F6I4Q1_VITVI2.00E-178Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIRAT5G278406.00E-175Calcineurin-like metallo-phosphoesterase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000149895535910276+
Transcript Sequence

Network for GWHGAAEX004789

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16891.4STPPase_N17637.60E-18
PF00149.27Metallophos662573.40E-38
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06269PPP1C mRNA surveillance pathway map03015
Hippo signaling pathwaymap04390
cAMP signaling pathwaymap04024
cGMP-PKG signaling pathwaymap04022
Meiosis - yeastmap04113
Oocyte meiosismap04114
Cellular senescencemap04218
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Insulin signaling pathwaymap04910
Oxytocin signaling pathwaymap04921
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Inflammatory mediator regulation of TRP channelsmap04750

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.160
SRR2545915Juvenile tuber13.090
SRP108465SRR5643513five period of Gastrodia elata14.590
SRR5643514five period of Gastrodia elata16.080
SRR5643515five period of Gastrodia elata18.100
SRR5643524five period of Gastrodia elata17.050
SRR5643525five period of Gastrodia elata31.280
SRR5643528five period of Gastrodia elata23.970
SRR5643658five period of Gastrodia elata44.820
SRR5643659five period of Gastrodia elata15.970
SRR5643660five period of Gastrodia elata14.440
SRR5643661five period of Gastrodia elata17.120
SRR5643662five period of Gastrodia elata20.120
SRR5643663five period of Gastrodia elata20.770
SRR5643664five period of Gastrodia elata23.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.790
SRR6049655Rhizomagastrodiae_C368-T10_good_119.210
SRR6049656Rhizomagastrodiae_C368-T07_good_114.500
SRR6049657Rhizomagastrodiae_C368-T07_good_114.540
SRR6049658Rhizomagastrodiae_C368-T04_good_118.530
SRR6049659Rhizomagastrodiae_C368-T04_good_117.930
SRR6049660Rhizomagastrodiae_C368-T01_good_113.120
SRR6049661Rhizomagastrodiae_C368-T04_good_117.070
SRR6049662Rhizomagastrodiae_C368-T01_good_117.180
SRR6049663Rhizomagastrodiae_C368-T01_good_114.530
SRR6049664Rhizomagastrodiae_C368-T10_good_116.260
SRR6049665Rhizomagastrodiae_C368-T10_good_116.260
SRP279888GastroGastrodia elata tuber 23.87
JuvenJuvenile tuber22.96
Mother_GastroMother tuber of Gastrodia elata 23.04
Mother_JuvenMother tuber of Juvenile 30.08