Detail information of GWHGAAEX004795/evm.TU.scaffold_153.24
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 9.00E-12 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 9.00E-41 | Serine/threonine protein kinase |
| nr | gi|474350828|gb|EMS63009.1| | 2.36E-48 | Receptor-like serine/threonine-protein kinase ALE2 [Triticum urartu] |
| Swissprot | tr|Q9XI96|PERK7_ARATH | 8.00E-28 | Proline-rich receptor-like protein kinase PERK7 |
| trEMBL | tr|M8APT4|M8APT4_TRIUA | 9.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_22448-P1} |
| TAIR | AT3G58690 | 9.00E-41 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000149 | 1340612 | 1385534 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004795
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 98 | 172 | 2.70E-16 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_Extensin |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.860 |
| SRR2545915 | Juvenile tuber | 2.560 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.720 |
| SRR5643514 | five period of Gastrodia elata | 2.150 | |
| SRR5643515 | five period of Gastrodia elata | 3.950 | |
| SRR5643524 | five period of Gastrodia elata | 2.680 | |
| SRR5643525 | five period of Gastrodia elata | 0.770 | |
| SRR5643528 | five period of Gastrodia elata | 0.480 | |
| SRR5643658 | five period of Gastrodia elata | 1.820 | |
| SRR5643659 | five period of Gastrodia elata | 1.140 | |
| SRR5643660 | five period of Gastrodia elata | 2.730 | |
| SRR5643661 | five period of Gastrodia elata | 1.910 | |
| SRR5643662 | five period of Gastrodia elata | 1.280 | |
| SRR5643663 | five period of Gastrodia elata | 1.280 | |
| SRR5643664 | five period of Gastrodia elata | 2.340 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.380 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.180 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.430 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.680 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.140 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.610 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.450 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.16 |
| Juven | Juvenile tuber | 1.83 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.78 | |
| Mother_Juven | Mother tuber of Juvenile | 2.83 |