Detail information of GWHGAAEX004796/evm.TU.scaffold_153.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|255573531|ref|XP_002527690.1|0conserved hypothetical protein [Ricinus communis]
Swissprottr|F4K5K4|TBL5_ARATH0Protein trichome birefringence-like 5
trEMBLtr|B9SNX1|B9SNX1_RICCO0Putative uncharacterized protein {ECO:0000313|EMBL:EEF34689.1}
TAIRAT5G205900TRICHOME BIREFRINGENCE-LIKE 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014915866051599763+
Transcript Sequence

Network for GWHGAAEX004796

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N1532074.10E-21
PF13839.5PC-Esterase2084861.20E-93
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.710
SRR2545915Juvenile tuber29.350
SRP108465SRR5643513five period of Gastrodia elata50.940
SRR5643514five period of Gastrodia elata47.530
SRR5643515five period of Gastrodia elata47.570
SRR5643524five period of Gastrodia elata46.490
SRR5643525five period of Gastrodia elata72.400
SRR5643528five period of Gastrodia elata57.810
SRR5643658five period of Gastrodia elata77.720
SRR5643659five period of Gastrodia elata35.580
SRR5643660five period of Gastrodia elata39.880
SRR5643661five period of Gastrodia elata34.620
SRR5643662five period of Gastrodia elata32.430
SRR5643663five period of Gastrodia elata35.660
SRR5643664five period of Gastrodia elata34.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.780
SRR6049655Rhizomagastrodiae_C368-T10_good_145.910
SRR6049656Rhizomagastrodiae_C368-T07_good_147.360
SRR6049657Rhizomagastrodiae_C368-T07_good_150.170
SRR6049658Rhizomagastrodiae_C368-T04_good_152.630
SRR6049659Rhizomagastrodiae_C368-T04_good_150.870
SRR6049660Rhizomagastrodiae_C368-T01_good_148.440
SRR6049661Rhizomagastrodiae_C368-T04_good_146.800
SRR6049662Rhizomagastrodiae_C368-T01_good_141.270
SRR6049663Rhizomagastrodiae_C368-T01_good_144.700
SRR6049664Rhizomagastrodiae_C368-T10_good_148.880
SRR6049665Rhizomagastrodiae_C368-T10_good_148.880
SRP279888GastroGastrodia elata tuber 27.12
JuvenJuvenile tuber25.27
Mother_GastroMother tuber of Gastrodia elata 43.52
Mother_JuvenMother tuber of Juvenile 21.05