Detail information of GWHGAAEX004797/evm.TU.scaffold_153.29
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|284166917|ref|YP_003405196.1| | 3.00E-66 | sugar transporter [Haloterrigena turkmenica DSM 5511] |
| KOG | KOG0254 | 0 | Predicted transporter (major facilitator superfamily) |
| nr | gi|672163269|ref|XP_008801476.1| | 0 | PREDICTED: sugar transport protein 14-like [Phoenix dactylifera] |
| Swissprot | tr|Q8GW61|STP14_ARATH | 0 | Sugar transport protein 14 |
| trEMBL | tr|M0T9B6|M0T9B6_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P22680_001} |
| TAIR | AT1G77210 | 0 | sugar transporter 14 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000149 | 1724284 | 1726979 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004797
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00083.23 | Sugar_tr | 30 | 490 | 9.50E-117 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 22.800 |
| SRR2545915 | Juvenile tuber | 23.330 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 85.750 |
| SRR5643514 | five period of Gastrodia elata | 52.110 | |
| SRR5643515 | five period of Gastrodia elata | 69.560 | |
| SRR5643524 | five period of Gastrodia elata | 60.890 | |
| SRR5643525 | five period of Gastrodia elata | 71.040 | |
| SRR5643528 | five period of Gastrodia elata | 34.420 | |
| SRR5643658 | five period of Gastrodia elata | 50.700 | |
| SRR5643659 | five period of Gastrodia elata | 51.760 | |
| SRR5643660 | five period of Gastrodia elata | 72.700 | |
| SRR5643661 | five period of Gastrodia elata | 69.830 | |
| SRR5643662 | five period of Gastrodia elata | 45.470 | |
| SRR5643663 | five period of Gastrodia elata | 46.240 | |
| SRR5643664 | five period of Gastrodia elata | 61.070 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 73.900 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 49.270 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 53.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 91.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 76.040 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 98.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 70.380 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 73.950 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 31.070 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 39.130 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 41.570 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 41.570 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 54.66 |
| Juven | Juvenile tuber | 69.89 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 85.11 | |
| Mother_Juven | Mother tuber of Juvenile | 73.62 |