Detail information of GWHGAAEX004815/evm.TU.scaffold_154.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672159071|ref|XP_008799287.1|1.85E-33PREDICTED: CASP-like protein MA4_106O17.50 isoform X2 [Phoenix dactylifera]
Swissprottr|Q1EPG7|CSPL1_MUSAC4.00E-34CASP-like protein 1E1
trEMBLtr|M0SUH3|M0SUH3_MUSAM6.00E-31CASP-like protein {ECO:0000256|RuleBase:RU361233}
TAIRAT5G445503.00E-15Uncharacterised protein family (UPF0497)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016310286861029730-
Transcript Sequence

Network for GWHGAAEX004815

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04535.11DUF588391922.70E-29
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.430
SRR2545915Juvenile tuber21.150
SRP108465SRR5643513five period of Gastrodia elata32.540
SRR5643514five period of Gastrodia elata26.270
SRR5643515five period of Gastrodia elata37.200
SRR5643524five period of Gastrodia elata29.140
SRR5643525five period of Gastrodia elata77.130
SRR5643528five period of Gastrodia elata56.610
SRR5643658five period of Gastrodia elata61.400
SRR5643659five period of Gastrodia elata26.910
SRR5643660five period of Gastrodia elata25.890
SRR5643661five period of Gastrodia elata28.080
SRR5643662five period of Gastrodia elata32.410
SRR5643663five period of Gastrodia elata28.840
SRR5643664five period of Gastrodia elata37.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.380
SRR6049655Rhizomagastrodiae_C368-T10_good_125.130
SRR6049656Rhizomagastrodiae_C368-T07_good_140.390
SRR6049657Rhizomagastrodiae_C368-T07_good_130.740
SRR6049658Rhizomagastrodiae_C368-T04_good_140.170
SRR6049659Rhizomagastrodiae_C368-T04_good_144.270
SRR6049660Rhizomagastrodiae_C368-T01_good_146.010
SRR6049661Rhizomagastrodiae_C368-T04_good_136.970
SRR6049662Rhizomagastrodiae_C368-T01_good_129.860
SRR6049663Rhizomagastrodiae_C368-T01_good_142.650
SRR6049664Rhizomagastrodiae_C368-T10_good_132.390
SRR6049665Rhizomagastrodiae_C368-T10_good_132.390
SRP279888GastroGastrodia elata tuber 35.03
JuvenJuvenile tuber47.56
Mother_GastroMother tuber of Gastrodia elata 58.40
Mother_JuvenMother tuber of Juvenile 43.91