Detail information of GWHGAAEX004817/evm.TU.scaffold_154.18
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332796609|ref|YP_004458109.1| | 4.00E-41 | metallophosphoesterase [Acidianus hospitalis W1] |
| KOG | KOG0379 | 0 | Kelch repeat-containing proteins |
| nr | gi|695075572|ref|XP_009385028.1| | 0 | PREDICTED: serine/threonine-protein phosphatase BSL1 homolog [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q60EX6|BSL1_ORYSJ | 0 | Serine/threonine-protein phosphatase BSL1 homolog |
| trEMBL | tr|C5YZZ9|C5YZZ9_SORBI | 0 | Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273} |
| TAIR | AT4G03080_1 | 0 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000163 | 1088163 | 1146402 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004817
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13418.5 | Kelch_4 | 30 | 96 | 0.00015 |
| PF13415.5 | Kelch_3 | 115 | 157 | 7.10E-05 |
| PF00149.27 | Metallophos | 590 | 797 | 2.60E-32 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0004721 | Molecular Function | phosphoprotein phosphatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 33.500 |
| SRR2545915 | Juvenile tuber | 25.590 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 24.740 |
| SRR5643514 | five period of Gastrodia elata | 27.140 | |
| SRR5643515 | five period of Gastrodia elata | 24.740 | |
| SRR5643524 | five period of Gastrodia elata | 25.730 | |
| SRR5643525 | five period of Gastrodia elata | 35.810 | |
| SRR5643528 | five period of Gastrodia elata | 38.050 | |
| SRR5643658 | five period of Gastrodia elata | 38.680 | |
| SRR5643659 | five period of Gastrodia elata | 26.070 | |
| SRR5643660 | five period of Gastrodia elata | 27.950 | |
| SRR5643661 | five period of Gastrodia elata | 23.110 | |
| SRR5643662 | five period of Gastrodia elata | 24.130 | |
| SRR5643663 | five period of Gastrodia elata | 27.400 | |
| SRR5643664 | five period of Gastrodia elata | 25.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 19.670 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.030 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 19.620 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.830 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.190 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 17.800 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.200 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.940 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 16.450 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.370 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.110 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.110 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 35.21 |
| Juven | Juvenile tuber | 33.78 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 35.69 | |
| Mother_Juven | Mother tuber of Juvenile | 44.73 |