Detail information of GWHGAAEX004819/evm.TU.scaffold_154.21
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|479127413|ref|YP_005067373.1| | 1.00E-35 | hypothetical protein [Arthrospira platensis NIES-39] |
| KOG | KOG3110 | 6.00E-37 | Riboflavin kinase |
| nr | gi|672181208|ref|XP_008810814.1| | 7.96E-166 | PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q84MD8|FHYRK_ARATH | 2.00E-145 | Riboflavin kinase |
| trEMBL | tr|A0A067JAP5|A0A067JAP5_JATCU | 7.00E-162 | Uncharacterized protein {ECO:0000313|EMBL:KDP20886.1} |
| TAIR | AT4G21470_2 | 6.00E-37 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000163 | 1472144 | 1497597 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004819
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13419.5 | HAD_2 | 38 | 205 | 1.40E-18 |
| PF01687.16 | Flavokinase | 250 | 385 | 4.00E-16 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20884 | FHY | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Riboflavin metabolism | map00740 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009231 | Biological Process | riboflavin biosynthetic process |
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0008531 | Molecular Function | riboflavin kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 43.230 |
| SRR2545915 | Juvenile tuber | 36.390 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 29.680 |
| SRR5643514 | five period of Gastrodia elata | 28.890 | |
| SRR5643515 | five period of Gastrodia elata | 28.320 | |
| SRR5643524 | five period of Gastrodia elata | 28.570 | |
| SRR5643525 | five period of Gastrodia elata | 40.340 | |
| SRR5643528 | five period of Gastrodia elata | 33.600 | |
| SRR5643658 | five period of Gastrodia elata | 39.970 | |
| SRR5643659 | five period of Gastrodia elata | 27.630 | |
| SRR5643660 | five period of Gastrodia elata | 28.370 | |
| SRR5643661 | five period of Gastrodia elata | 28.680 | |
| SRR5643662 | five period of Gastrodia elata | 31.840 | |
| SRR5643663 | five period of Gastrodia elata | 30.670 | |
| SRR5643664 | five period of Gastrodia elata | 28.780 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 35.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 38.120 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 32.640 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 35.240 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 35.810 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 33.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 32.410 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 35.760 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 36.640 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 36.390 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 43.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 43.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.71 |
| Juven | Juvenile tuber | 38.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 29.27 | |
| Mother_Juven | Mother tuber of Juvenile | 30.32 |