Detail information of GWHGAAEX004820/evm.TU.scaffold_154.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672108398|ref|XP_008784950.1|5.08E-73PREDICTED: uncharacterized protein At2g34160-like [Phoenix dactylifera]
Swissprottr|O22969|Y2416_ARATH7.00E-66Uncharacterized protein At2g34160
trEMBLtr|A0A075BWF6|A0A075BWF6_ELAGV8.00E-72Uncharacterized protein {ECO:0000313|EMBL:AGS17822.1} (Fragment)
TAIRAT2G341603.00E-65Alba DNA/RNA-binding protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016315150851520004+
Transcript Sequence

Network for GWHGAAEX004820

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01918.20Alba20801.50E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms119.580
SRR2545915Juvenile tuber165.790
SRP108465SRR5643513five period of Gastrodia elata167.560
SRR5643514five period of Gastrodia elata172.960
SRR5643515five period of Gastrodia elata157.070
SRR5643524five period of Gastrodia elata154.630
SRR5643525five period of Gastrodia elata136.500
SRR5643528five period of Gastrodia elata111.430
SRR5643658five period of Gastrodia elata103.950
SRR5643659five period of Gastrodia elata161.150
SRR5643660five period of Gastrodia elata165.930
SRR5643661five period of Gastrodia elata158.900
SRR5643662five period of Gastrodia elata143.920
SRR5643663five period of Gastrodia elata148.850
SRR5643664five period of Gastrodia elata141.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1149.270
SRR6049655Rhizomagastrodiae_C368-T10_good_1229.320
SRR6049656Rhizomagastrodiae_C368-T07_good_1186.820
SRR6049657Rhizomagastrodiae_C368-T07_good_1136.520
SRR6049658Rhizomagastrodiae_C368-T04_good_1158.540
SRR6049659Rhizomagastrodiae_C368-T04_good_1126.850
SRR6049660Rhizomagastrodiae_C368-T01_good_1152.520
SRR6049661Rhizomagastrodiae_C368-T04_good_1162.150
SRR6049662Rhizomagastrodiae_C368-T01_good_1205.020
SRR6049663Rhizomagastrodiae_C368-T01_good_1185.920
SRR6049664Rhizomagastrodiae_C368-T10_good_1201.890
SRR6049665Rhizomagastrodiae_C368-T10_good_1201.890
SRP279888GastroGastrodia elata tuber 241.59
JuvenJuvenile tuber243.93
Mother_GastroMother tuber of Gastrodia elata 168.81
Mother_JuvenMother tuber of Juvenile 145.90