Detail information of GWHGAAEX004825/evm.TU.scaffold_154.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13045.00E-149Amino acid transporters
nrgi|672110623|ref|XP_008796447.1|0PREDICTED: proton-coupled amino acid transporter 3 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9FKS8|LHT1_ARATH8.00E-14Lysine histidine transporter 1
trEMBLtr|I1Q975|I1Q975_ORYGL9.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA07G0066700.1}
TAIRAT3G119005.00E-149aromatic and neutral transporter 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016319364801961811+
Transcript Sequence

Network for GWHGAAEX004825

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans274224.90E-82
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14209SLC36A, PAT Autophagy - yeast map04138
Protein digestion and absorptionmap04974

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.850
SRR2545915Juvenile tuber13.040
SRP108465SRR5643513five period of Gastrodia elata15.250
SRR5643514five period of Gastrodia elata16.750
SRR5643515five period of Gastrodia elata13.610
SRR5643524five period of Gastrodia elata16.790
SRR5643525five period of Gastrodia elata30.710
SRR5643528five period of Gastrodia elata25.760
SRR5643658five period of Gastrodia elata33.290
SRR5643659five period of Gastrodia elata11.090
SRR5643660five period of Gastrodia elata11.260
SRR5643661five period of Gastrodia elata9.210
SRR5643662five period of Gastrodia elata12.320
SRR5643663five period of Gastrodia elata13.400
SRR5643664five period of Gastrodia elata10.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.950
SRR6049655Rhizomagastrodiae_C368-T10_good_116.520
SRR6049656Rhizomagastrodiae_C368-T07_good_115.640
SRR6049657Rhizomagastrodiae_C368-T07_good_120.290
SRR6049658Rhizomagastrodiae_C368-T04_good_119.000
SRR6049659Rhizomagastrodiae_C368-T04_good_121.870
SRR6049660Rhizomagastrodiae_C368-T01_good_119.730
SRR6049661Rhizomagastrodiae_C368-T04_good_118.520
SRR6049662Rhizomagastrodiae_C368-T01_good_118.380
SRR6049663Rhizomagastrodiae_C368-T01_good_118.520
SRR6049664Rhizomagastrodiae_C368-T10_good_116.390
SRR6049665Rhizomagastrodiae_C368-T10_good_116.390
SRP279888GastroGastrodia elata tuber 8.71
JuvenJuvenile tuber12.28
Mother_GastroMother tuber of Gastrodia elata 8.92
Mother_JuvenMother tuber of Juvenile 8.68