Detail information of GWHGAAEX004849/evm.TU.scaffold_155.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672190590|ref|XP_008775290.1|3.10E-177PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Phoenix dactylifera]
Swissprottr|Q8L868|E1311_ARATH3.00E-146Glucan endo-1,3-beta-glucosidase 11 (Precursor)
trEMBLtr|Q5NKR8|Q5NKR8_PENAM3.00E-150Putative beta-1,3-glucanase {ECO:0000313|EMBL:AAQ06269.1}
TAIRAT1G328606.00E-146Glycosyl hydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015211882471197771-
Transcript Sequence

Network for GWHGAAEX004849

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17263433.30E-91
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17
Carbohydrate-Active enzymes FamilyGH17

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.770
SRR2545915Juvenile tuber4.590
SRP108465SRR5643513five period of Gastrodia elata7.800
SRR5643514five period of Gastrodia elata6.700
SRR5643515five period of Gastrodia elata8.130
SRR5643524five period of Gastrodia elata6.550
SRR5643525five period of Gastrodia elata16.780
SRR5643528five period of Gastrodia elata19.610
SRR5643658five period of Gastrodia elata24.520
SRR5643659five period of Gastrodia elata8.800
SRR5643660five period of Gastrodia elata6.090
SRR5643661five period of Gastrodia elata9.450
SRR5643662five period of Gastrodia elata11.470
SRR5643663five period of Gastrodia elata11.000
SRR5643664five period of Gastrodia elata24.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.510
SRR6049655Rhizomagastrodiae_C368-T10_good_19.990
SRR6049656Rhizomagastrodiae_C368-T07_good_110.230
SRR6049657Rhizomagastrodiae_C368-T07_good_17.250
SRR6049658Rhizomagastrodiae_C368-T04_good_17.650
SRR6049659Rhizomagastrodiae_C368-T04_good_13.870
SRR6049660Rhizomagastrodiae_C368-T01_good_18.560
SRR6049661Rhizomagastrodiae_C368-T04_good_15.940
SRR6049662Rhizomagastrodiae_C368-T01_good_112.530
SRR6049663Rhizomagastrodiae_C368-T01_good_112.290
SRR6049664Rhizomagastrodiae_C368-T10_good_112.340
SRR6049665Rhizomagastrodiae_C368-T10_good_112.340
SRP279888GastroGastrodia elata tuber 5.93
JuvenJuvenile tuber3.04
Mother_GastroMother tuber of Gastrodia elata 2.14
Mother_JuvenMother tuber of Juvenile 1.63