Detail information of GWHGAAEX004850/evm.TU.scaffold_155.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383762160|ref|YP_005441142.1|8.00E-15putative glycerophosphoryl diester phosphodiesterase [Caldilinea aerophila DSM 14535 = NBRC 104270]
KOGKOG24211.00E-116Predicted starch-binding protein
nrgi|672134880|ref|XP_008791094.1|1.18E-127PREDICTED: glycerophosphodiester phosphodiesterase gde1-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9SGA2|GDPD1_ARATH4.00E-117Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic {ECO:0000305} (Precursor)
trEMBLtr|M0TNX3|M0TNX3_MUSAM3.00E-121Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P09200_001}
TAIRAT3G020401.00E-116senescence-related gene 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015212174001218855-
Transcript Sequence

Network for GWHGAAEX004850

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03009.16GDPD373117.10E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18696GDE1 Glycerophospholipid metabolism map00564

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process
GO:0008081Molecular Functionphosphoric diester hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms130.070
SRR2545915Juvenile tuber42.010
SRP108465SRR5643513five period of Gastrodia elata119.590
SRR5643514five period of Gastrodia elata177.880
SRR5643515five period of Gastrodia elata185.870
SRR5643524five period of Gastrodia elata131.680
SRR5643525five period of Gastrodia elata1434.660
SRR5643528five period of Gastrodia elata816.200
SRR5643658five period of Gastrodia elata1572.610
SRR5643659five period of Gastrodia elata44.510
SRR5643660five period of Gastrodia elata25.980
SRR5643661five period of Gastrodia elata23.620
SRR5643662five period of Gastrodia elata85.490
SRR5643663five period of Gastrodia elata40.080
SRR5643664five period of Gastrodia elata114.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1183.190
SRR6049655Rhizomagastrodiae_C368-T10_good_199.450
SRR6049656Rhizomagastrodiae_C368-T07_good_1218.640
SRR6049657Rhizomagastrodiae_C368-T07_good_1233.170
SRR6049658Rhizomagastrodiae_C368-T04_good_1200.950
SRR6049659Rhizomagastrodiae_C368-T04_good_1245.980
SRR6049660Rhizomagastrodiae_C368-T01_good_1193.290
SRR6049661Rhizomagastrodiae_C368-T04_good_1196.250
SRR6049662Rhizomagastrodiae_C368-T01_good_1141.520
SRR6049663Rhizomagastrodiae_C368-T01_good_1120.740
SRR6049664Rhizomagastrodiae_C368-T10_good_1176.550
SRR6049665Rhizomagastrodiae_C368-T10_good_1176.550
SRP279888GastroGastrodia elata tuber 7.16
JuvenJuvenile tuber36.16
Mother_GastroMother tuber of Gastrodia elata 621.69
Mother_JuvenMother tuber of Juvenile 101.61