Detail information of GWHGAAEX004872/evm.TU.scaffold_155.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31492.00E-119Transcription initiation factor IIF, auxiliary subunit
nrgi|743854638|ref|XP_010940986.1|1.97E-152PREDICTED: transcription initiation factor TFIID subunit 14b isoform X2 [Elaeis guineensis]
Swissprottr|Q9FH40|TA14B_ARATH7.00E-120Transcription initiation factor TFIID subunit 14b
trEMBLtr|M0T0G3|M0T0G3_MUSAM6.00E-150Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P21340_001}
TAIRAT5G456002.00E-119YEATS family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015221209052148745-
Transcript Sequence

Network for GWHGAAEX004872

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03366.15YEATS371162.70E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.320
SRR2545915Juvenile tuber43.080
SRP108465SRR5643513five period of Gastrodia elata34.260
SRR5643514five period of Gastrodia elata36.480
SRR5643515five period of Gastrodia elata32.490
SRR5643524five period of Gastrodia elata34.510
SRR5643525five period of Gastrodia elata35.200
SRR5643528five period of Gastrodia elata34.200
SRR5643658five period of Gastrodia elata40.920
SRR5643659five period of Gastrodia elata31.780
SRR5643660five period of Gastrodia elata28.380
SRR5643661five period of Gastrodia elata26.970
SRR5643662five period of Gastrodia elata26.330
SRR5643663five period of Gastrodia elata29.580
SRR5643664five period of Gastrodia elata29.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.150
SRR6049655Rhizomagastrodiae_C368-T10_good_129.810
SRR6049656Rhizomagastrodiae_C368-T07_good_129.430
SRR6049657Rhizomagastrodiae_C368-T07_good_136.440
SRR6049658Rhizomagastrodiae_C368-T04_good_129.490
SRR6049659Rhizomagastrodiae_C368-T04_good_129.550
SRR6049660Rhizomagastrodiae_C368-T01_good_130.240
SRR6049661Rhizomagastrodiae_C368-T04_good_130.820
SRR6049662Rhizomagastrodiae_C368-T01_good_127.650
SRR6049663Rhizomagastrodiae_C368-T01_good_128.850
SRR6049664Rhizomagastrodiae_C368-T10_good_133.010
SRR6049665Rhizomagastrodiae_C368-T10_good_133.010
SRP279888GastroGastrodia elata tuber 31.62
JuvenJuvenile tuber54.13
Mother_GastroMother tuber of Gastrodia elata 24.90
Mother_JuvenMother tuber of Juvenile 37.15