Detail information of GWHGAAEX004887/evm.TU.scaffold_156.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|459289706|ref|YP_007512863.1|3.00E-51GTP-binding protein [Bradyrhizobium oligotrophicum S58]
KOGKOG14231.00E-159Ras-like GTPase ERA
nrgi|672184287|ref|XP_008812448.1|0PREDICTED: GTP-binding protein ERG [Phoenix dactylifera]
Swissprottr|O82626|ERG_ANTMA7.00E-163GTP-binding protein ERG
trEMBLtr|C5YIK2|C5YIK2_SORBI0Putative uncharacterized protein Sb07g006070 {ECO:0000313|EMBL:EES13521.1}
TAIRAT1G309601.00E-159GTP-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000160292413323795-
Transcript Sequence

Network for GWHGAAEX004887

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR11502752.10E-17
PF07650.16KH_23594341.30E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003723Molecular FunctionRNA binding
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.820
SRR2545915Juvenile tuber24.340
SRP108465SRR5643513five period of Gastrodia elata18.690
SRR5643514five period of Gastrodia elata20.180
SRR5643515five period of Gastrodia elata15.220
SRR5643524five period of Gastrodia elata18.030
SRR5643525five period of Gastrodia elata17.290
SRR5643528five period of Gastrodia elata16.060
SRR5643658five period of Gastrodia elata16.980
SRR5643659five period of Gastrodia elata19.750
SRR5643660five period of Gastrodia elata19.630
SRR5643661five period of Gastrodia elata17.120
SRR5643662five period of Gastrodia elata19.640
SRR5643663five period of Gastrodia elata19.820
SRR5643664five period of Gastrodia elata18.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.210
SRR6049655Rhizomagastrodiae_C368-T10_good_120.250
SRR6049656Rhizomagastrodiae_C368-T07_good_119.920
SRR6049657Rhizomagastrodiae_C368-T07_good_120.750
SRR6049658Rhizomagastrodiae_C368-T04_good_118.030
SRR6049659Rhizomagastrodiae_C368-T04_good_118.600
SRR6049660Rhizomagastrodiae_C368-T01_good_118.720
SRR6049661Rhizomagastrodiae_C368-T04_good_118.730
SRR6049662Rhizomagastrodiae_C368-T01_good_116.920
SRR6049663Rhizomagastrodiae_C368-T01_good_116.380
SRR6049664Rhizomagastrodiae_C368-T10_good_121.960
SRR6049665Rhizomagastrodiae_C368-T10_good_121.960
SRP279888GastroGastrodia elata tuber 18.41
JuvenJuvenile tuber18.31
Mother_GastroMother tuber of Gastrodia elata 10.85
Mother_JuvenMother tuber of Juvenile 9.98