Gene detail

Detail information of GWHGAAEX004889/evm.TU.scaffold_156.9

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672183088\|ref\|XP_008811810.1\|	0	PREDICTED: uncharacterized protein LOC103722881 [Phoenix dactylifera]
Swissprot	tr\|Q9C5X4\|ATX1_ARATH	6.00E-06	Histone-lysine N-methyltransferase ATX1
trEMBL	tr\|D7T9Z3\|D7T9Z3_VITVI	9.00E-111	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI27315.3}
trEMBL	tr\|D7T9Z3\|D7T9Z3_VITVI	2.00E-47	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI27315.3}
TAIR	AT1G26330	7.00E-85	DNA binding

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000160	382285	465315	+

Transcript Sequence
>GWHTAAEX004889 GCGCGGGCTCCTCAATTTTCATCAGTTTCACTTTTTTGTCAGGTTCTCGCTTCTCTTTTTCGATCGATGGAGTACCACAGTGGTGACATGCCAGACGACCTAGAGATCGCCTCCATTGGCTCACTTTATGTCGGCCCCTGGGACAAAAAATATTGGAGCTGCTCTAGGGGAAAAGATCGTTACCCTTATCCACTTGGTTATCGTGCTATTCGAACCCATGCTGGAAGTATTTGTCAGATGGAAGTTTGTGAAGGTTTGAAAGGGCCTCTATTTGTTATCTCAGCAGTTGATGGGAGTTCATTTAGCGGTCAAACACCTGATATTGCTTGGGATAATTTCCAGAAGAACTGTCCCAAAGTGAAGAATTGGAATGGGAAGCGGTTTTCAAATAAGTCTGATGGTCCCGAGCTTTTTGGATTCAAAAATCCCTCCATCCAGAGACTGCTCCGTGAGCTTGTGAACACCACACAAGGAAGAAGTTTGCCATCATCCTGCTGCAATGAATCCAAGAACAAGGACCAAATTCATTCTGGGGTCTCTAACTGGAGTCCCAGTTTATCATCTGCCTTAGAAGAACAACTTAATTCTGGAAAGAGAATTCAAATGAAGAGAAATGCTCGAAGAGATATGAGAGAAGTGAGACCAAAAAAAGTCTGCCATCAGGGTTTACAAATTAACTTAAAAATGGATATTTCACAAAGAATAGAAGATCTGTGTCCTCTTTCCCTGATCAACAATGCGATGCAGTCAAATGGAAAGCACATAACCTCACATAAAAAAGATTTTACAAATAAGGAAAATTTCAGCTGTCATTGTACCTCGCTGAATGACACTTCTCATTTATTGCACGTGACACCATCTGATTTGCATTGCCAGAAGGAAACTCCTATAATTTCAGGTAACATAAGCCAGGATATCAAATTAACGATGCAAGGAGAACCAGAAGTAAACTGTCATTCCGTTGCTTCAAATATGATTCCGATGGTTTTGGACTGTTTGGACTCTCTTGTTGATAAACACATTGTTTCTCAGCAGAATGATTGTGTAGAGATTCAAACTCAGAGCATCTCACCTGGCCTGGATAATAGCAACACTTCTATCAAAACAAAGCTTGATCGGTGTCTCGATACTGAAAATGAAAGGTGTATTCTAGCCTCACCAGGCCCAAAAGGTGATTGCAGGAAGCTCAATGCATTGACATGCTTCTCTGATGTCCGCATTTCTGAGACTTGTGACCCTGCTATTGGTGAGGTAGCAACTTCTGTTGCAGATCACTTCAATGAAAAGTCAGCCTGCATGACGAGTGAGCTTGTTGTAGTCAATCCTTTGCCTAAAACATTTAAATGCCATTCACTAGACATTGAATCTAAGAGTGGGTTCGATGGTTTGACTAACAGCAACAACATGGAACCGTTTGGTTCAGCACTAAGACAGTTAACGCCCCATGAGTTCTTTCACCCCGATTGCATCCCTGATGATGGTGTTTATCAAAGAGCAGCTAAAGATTCTCTTCCAGAAGCTGCCTCTTCCGATTTTTCTGGTGCAAGTTTAGAAAATGTTGACTTGTACTTAGCCGGACAGGAGTTGGCTAAATCAATGATGACTTTCTTGCTTCCACAAGCAGTTCCTTTACTTCAAAAAACCTATGCAAGAAGAAGATCAAGAGCAAGACTTTCGGAAGGGAATGTTGATCCTTTGACTGGTGGCAATTCTGCAGACCTGAGTGCTGGAAATGACCATTTCAACAATATCATGCATCAAGGGGAACTTGAGGCTGGAACACTTGCTCAGCTCCCCGAAAAGACTGCCAAGGAGGGTATCGAAGCCTCAAAGGCATTATCACAAGTTTGTCCCTTTGATAATTTCAATAGTTATAACCCGAACTTACCCAATGAGCCATTATTGAAAAATAAAAGTTCAAACGATCCCAAGTTTGTCATTCCTGATAGCTTTGAGAATGATATATGCTCATACGGTGCTTCTAGGCAGGAATACCTATCTATGAGCTCTGTTGACTCTGATACTGCATTTCAAAATGATACCATAGGAAATAATGATACCACAAGCTTGTCTATTAATTCGGACAAGATTAGTGACTTGGAATATTTTTCTCATAATGATGCATACAATATAGCTCTTACTGTCAATAAAAAAAATGAACTGGCTAATTCTATGATAACTGTAGAATCTGCCAAGCATATTCTTCCATCTAGAGAGACTGCTGAAGAAATCAAAGTGAACATTGTGAAAAATTCACAGTGTTTTACTTTAAATCATAGTTGCTTGGACGTTTCTCCTGTTATGCAACGTTACAACAGTTTGCACTTTAACCATGAATCTAAACATTATGCAGAAGAGGGAAGTCTCCAAGCAATTTTGGGGGAGTGTCTCAGTAAATCTGAAAATGCTGAACTAAAGAATCCTACTTTAAGCCCTAATCTTGATAAATGGATTGATAAAGCAGTTACTAAAGAAGTTATTGAAAGCCACGATGAATCTGGATCCATAAAGGAGAGACCTGGAAATTATAATCTCATTGAGCATGCTAATGCTAGTCTGATTGGAATCAATAAAGGCGAACCAGTCAGTGATAAGAACATCCAATCTTTGCTTTGCAGTCCTAAGGCTGTACTGGTTACTGGAAGGATCCTCACTAATACCGTTGGGGAAGAAAGATCCAATGGTGTGCTACTCTCTTCAGTACAATGCATTGCTCCTCTGTCGGAAACTTTATTGGGTAGAAATCTGAGTAATTTTGATGTGCCAGAGTTGAACTCTGCTAGAAAGTCCTTACAAATTGTTGAAAATTATCAATCCAGTTGTATAAATTACAAAGATTCTAGGATGCTTGCTAGGTCTGAAGTTGGGAATGATAAACCAAAATTCAATACAGCTAATGATTTAAATGCATCTGAACTTGATGCCAACTACCTCTATACTGATGCCATGGCCATTCAAAGCCATGATGTGGATAAAAATATTACAGGAATTGCTAATGTGCCTCAAACTAATTGTTCTTTTTCATGTGACAAAACAGTCACTTTAGATGCAGTACACGGGTTCTCTACGCCTGAATTGTACTCTTTGCTTCAGGTCAAGAATGGGAAAATAGAAGTTGCTGAACAAAGCAGAAGATTTACCCATAGCCATCTTCAGCCTTCTTACAAGAATCCACTTATGGATAGTTTCTCTGATAAAAATACATGCATTCAACCAGCTACTAACAATAGCCATAAAGAATATTCTTTAACTGGTCTCTGCAAGGAAACTATTTTAGATAGTTCATTTGGTAAAAGGTTGAGCTGGAATATTGGGGACAGGATTATGGAGCTTGTTGGCTGCTATTTGCATCCAGAACCTGTCTTGTCCATGCTGTTAGCCACAAACAGTAATCAATTGCAACTTTGTGTCTTAAGTGGCTTTCCTGACAGTAACATTCGACACATATTTATGTATAGTGTGCCTATTCAAAGTCAGAGGAAAAGTTGTCCTTCTTTTCTTGGTTACACGTCTCTCTTGTTGCCCCTCCTGAGAAATCAATGGAACAGCAATATTCCTTTTGAAAGACCTGCATTGCAGTTGGCTCCTAATGGGCAATCTCTCATTTTTGTGAGCAGCATCAAAGCACCCCGTTGCAGGAAACAAAAGATCTGCTGTTTATGCTCGAACTGCAAATCTGAGCCTTCTGAAGAAACAACCATAGACGTTGTTCATGTAAAATTTGGTTATGTTTCAATAATAACCAAAATGATGACTCACGAGAGAATATCTTGCATATTAGTTTGCGAACCAAGTTATCTTATAGCAGTTGAGGAGAATGGGGAACTGCATGTTTGGGTTATGAATCTAACGTGGAGTGGCTATTTGGAGGAGTTTATGCTTCCAAGTTTTGATCATATATCACCTATTATATTAGAGCTGAAAAGAATACCAAACTGTGATTCTCTTATAATTGGTCACAATGGGCTCGGTGATTTTGGCATATGGGAAATTTCCAGGAGGAGTCTCTTAGCCAAAATTTCTTCTCCAGGAAGTACAATCTTTCAATTTATTCCAGTATCTGTGTTCAATTGGCAAATGAGTGCAACCTTTTCTACCACTCAATCAGAAGAGCATAAACTGGAGAGTATGCTAAAATCAAAGTGCAAAATATCCTTAGGATCATCATTTGAAGATATATCAATTATGCTATTGATTTCAACTGCTCCCGACTTGGAGGTAGAGCTTGAAACAAAGGAGTTAGGCACAAGTTTTACTGGATTATGGAGGCTAGCACTCCTGACCAACAACATGATGATCATGGGAAAAATCTTGGACCCTAGGGCTACTGCTGTAGGTGCATTGGCAGATAGAGGGATTATCGGAACAAGTGATGGTTGCTCATATATATGGGAATTATCATCTGGTAGAAAACTGGGAGATTTAGCCTCGCTTAAGTGTGGCGTTTCATGTGTGGCAATTGATAGCAAATCGGGTGCTTTGGCGGTGGCAGGCAGAGATGGGGCGCTGCAACTTTTTATTGATGCATGAAACATACAGCATTCTTCATCTTGTGCTCATGTAAAAAGCCCTGAGTAGCTTTTGTAAGTAAATTCATGTATTATAATCTCTTTTGTATGTATATATTCTTAAAGAGATTTTTATTTTCATTTTGAAACTATACACTAAATTTTAAATATGAGAAATATAACAAGGGTGC

Network for GWHGAAEX004889

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05965.13	FYRC	66	132	6.60E-07

Protein Sequence

>GWHPAAEX004889
MEYHSGDMPDDLEIASIGSLYVGPWDKKYWSCSRGKDRYPYPLGYRAIRTHAGSICQMEVCEGLKGPLFVISAVDGSSFSGQTPDIAWDNFQKNCPKVKNWNGKRFSNKSDGPELFGFKNPSIQRLLRELVNTTQGRSLPSSCCNESKNKDQIHSGVSNWSPSLSSALEEQLNSGKRIQMKRNARRDMREVRPKKVCHQGLQINLKMDISQRIEDLCPLSLINNAMQSNGKHITSHKKDFTNKENFSCHCTSLNDTSHLLHVTPSDLHCQKETPIISGNISQDIKLTMQGEPEVNCHSVASNMIPMVLDCLDSLVDKHIVSQQNDCVEIQTQSISPGLDNSNTSIKTKLDRCLDTENERCILASPGPKGDCRKLNALTCFSDVRISETCDPAIGEVATSVADHFNEKSACMTSELVVVNPLPKTFKCHSLDIESKSGFDGLTNSNNMEPFGSALRQLTPHEFFHPDCIPDDGVYQRAAKDSLPEAASSDFSGASLENVDLYLAGQELAKSMMTFLLPQAVPLLQKTYARRRSRARLSEGNVDPLTGGNSADLSAGNDHFNNIMHQGELEAGTLAQLPEKTAKEGIEASKALSQVCPFDNFNSYNPNLPNEPLLKNKSSNDPKFVIPDSFENDICSYGASRQEYLSMSSVDSDTAFQNDTIGNNDTTSLSINSDKISDLEYFSHNDAYNIALTVNKKNELANSMITVESAKHILPSRETAEEIKVNIVKNSQCFTLNHSCLDVSPVMQRYNSLHFNHESKHYAEEGSLQAILGECLSKSENAELKNPTLSPNLDKWIDKAVTKEVIESHDESGSIKERPGNYNLIEHANASLIGINKGEPVSDKNIQSLLCSPKAVLVTGRILTNTVGEERSNGVLLSSVQCIAPLSETLLGRNLSNFDVPELNSARKSLQIVENYQSSCINYKDSRMLARSEVGNDKPKFNTANDLNASELDANYLYTDAMAIQSHDVDKNITGIANVPQTNCSFSCDKTVTLDAVHGFSTPELYSLLQVKNGKIEVAEQSRRFTHSHLQPSYKNPLMDSFSDKNTCIQPATNNSHKEYSLTGLCKETILDSSFGKRLSWNIGDRIMELVGCYLHPEPVLSMLLATNSNQLQLCVLSGFPDSNIRHIFMYSVPIQSQRKSCPSFLGYTSLLLPLLRNQWNSNIPFERPALQLAPNGQSLIFVSSIKAPRCRKQKICCLCSNCKSEPSEETTIDVVHVKFGYVSIITKMMTHERISCILVCEPSYLIAVEENGELHVWVMNLTWSGYLEEFMLPSFDHISPIILELKRIPNCDSLIIGHNGLGDFGIWEISRRSLLAKISSPGSTIFQFIPVSVFNWQMSATFSTTQSEEHKLESMLKSKCKISLGSSFEDISIMLLISTAPDLEVELETKELGTSFTGLWRLALLTNNMMIMGKILDPRATAVGALADRGIIGTSDGCSYIWELSSGRKLGDLASLKCGVSCVAIDSKSGALAVAGRDGALQLFIDA

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding
GO:0005634	Cellular Component	nucleus

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.310
SRP064423	SRR2545915	Juvenile tuber	3.300
SRP108465	SRR5643513	five period of Gastrodia elata	3.800
	SRR5643514	five period of Gastrodia elata	4.010
	SRR5643515	five period of Gastrodia elata	3.560
	SRR5643524	five period of Gastrodia elata	3.710
	SRR5643525	five period of Gastrodia elata	4.660
	SRR5643528	five period of Gastrodia elata	4.240
	SRR5643658	five period of Gastrodia elata	7.540
	SRR5643659	five period of Gastrodia elata	1.840
	SRR5643660	five period of Gastrodia elata	1.690
	SRR5643661	five period of Gastrodia elata	2.000
	SRR5643662	five period of Gastrodia elata	1.620
	SRR5643663	five period of Gastrodia elata	1.730
	SRR5643664	five period of Gastrodia elata	1.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.600
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.840
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.860
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.920
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.270
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.290
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.240
SRP279888	Gastro	Gastrodia elata tuber	2.30
	Juven	Juvenile tuber	3.26
	Mother_Gastro	Mother tuber of Gastrodia elata	2.40
	Mother_Juven	Mother tuber of Juvenile	6.78