Detail information of GWHGAAEX004894/evm.TU.scaffold_156.16
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2791 | 0 | N-acetylglucosaminyltransferase |
| nr | gi|672115701|ref|XP_008780994.1| | 0 | PREDICTED: alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Phoenix dactylifera] |
| trEMBL | tr|K3YSG2|K3YSG2_SETIT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si017206m} |
| TAIR | AT2G05320 | 0 | beta-1,2-N-acetylglucosaminyltransferase II |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000160 | 603416 | 626945 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004894
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05060.13 | MGAT2 | 98 | 426 | 2.60E-96 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT16 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00736 | MGAT2 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Various types of N-glycan biosynthesis | map00513 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009312 | Biological Process | oligosaccharide biosynthetic process |
| GO:0008455 | Molecular Function | alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0005795 | Cellular Component | Golgi stack |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.350 |
| SRR2545915 | Juvenile tuber | 24.380 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.100 |
| SRR5643514 | five period of Gastrodia elata | 19.020 | |
| SRR5643515 | five period of Gastrodia elata | 20.940 | |
| SRR5643524 | five period of Gastrodia elata | 20.580 | |
| SRR5643525 | five period of Gastrodia elata | 25.920 | |
| SRR5643528 | five period of Gastrodia elata | 21.990 | |
| SRR5643658 | five period of Gastrodia elata | 20.080 | |
| SRR5643659 | five period of Gastrodia elata | 27.450 | |
| SRR5643660 | five period of Gastrodia elata | 27.440 | |
| SRR5643661 | five period of Gastrodia elata | 25.690 | |
| SRR5643662 | five period of Gastrodia elata | 22.350 | |
| SRR5643663 | five period of Gastrodia elata | 25.500 | |
| SRR5643664 | five period of Gastrodia elata | 20.040 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.830 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 19.190 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.410 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.600 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.310 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.720 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 21.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 28.010 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 28.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.940 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 24.350 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 24.350 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 25.91 |
| Juven | Juvenile tuber | 23.73 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 23.28 | |
| Mother_Juven | Mother tuber of Juvenile | 22.44 |