Detail information of GWHGAAEX004895/evm.TU.scaffold_156.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428318270|ref|YP_007116152.1|2.00E-06filamentous hemagglutinin family outer membrane protein [Oscillatoria nigro-viridis PCC 7112]
nrgi|743837449|ref|XP_010936409.1|1.19E-32PREDICTED: formin-A-like [Elaeis guineensis]
trEMBLtr|M0T2V8|M0T2V8_MUSAM5.00E-22Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P00100_001}
TAIRAT1G510901.00E-08Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000160712272719807+
Transcript Sequence

Network for GWHGAAEX004895

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms74.060
SRR2545915Juvenile tuber146.470
SRP108465SRR5643513five period of Gastrodia elata93.740
SRR5643514five period of Gastrodia elata129.340
SRR5643515five period of Gastrodia elata95.880
SRR5643524five period of Gastrodia elata105.100
SRR5643525five period of Gastrodia elata383.210
SRR5643528five period of Gastrodia elata252.980
SRR5643658five period of Gastrodia elata462.720
SRR5643659five period of Gastrodia elata147.070
SRR5643660five period of Gastrodia elata157.170
SRR5643661five period of Gastrodia elata158.540
SRR5643662five period of Gastrodia elata288.020
SRR5643663five period of Gastrodia elata319.250
SRR5643664five period of Gastrodia elata250.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.620
SRR6049655Rhizomagastrodiae_C368-T10_good_187.850
SRR6049656Rhizomagastrodiae_C368-T07_good_159.320
SRR6049657Rhizomagastrodiae_C368-T07_good_139.940
SRR6049658Rhizomagastrodiae_C368-T04_good_137.310
SRR6049659Rhizomagastrodiae_C368-T04_good_135.420
SRR6049660Rhizomagastrodiae_C368-T01_good_128.020
SRR6049661Rhizomagastrodiae_C368-T04_good_142.020
SRR6049662Rhizomagastrodiae_C368-T01_good_161.940
SRR6049663Rhizomagastrodiae_C368-T01_good_142.660
SRR6049664Rhizomagastrodiae_C368-T10_good_171.050
SRR6049665Rhizomagastrodiae_C368-T10_good_171.050
SRP279888GastroGastrodia elata tuber 182.17
JuvenJuvenile tuber18.67
Mother_GastroMother tuber of Gastrodia elata 78.28
Mother_JuvenMother tuber of Juvenile 20.49