Gene detail

Detail information of GWHGAAEX004897/evm.TU.scaffold_156.21

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695042304\|ref\|XP_009408800.1\|	8.98E-131	PREDICTED: transcriptional regulator STERILE APETALA-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9FKH1\|SAP_ARATH	2.00E-82	Transcriptional regulator STERILE APETALA
trEMBL	tr\|M0S7R2\|M0S7R2_MUSAM	6.00E-102	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P13710_001}
TAIR	AT5G35770	6.00E-82	Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000160	822782	845430	+

Transcript Sequence
>GWHTAAEX004897 CCTCTTCTCTCTCTCTCTCTTAGCAGAAGCACGTAGTGTTGATCTGTTTTGGGAGTGAGGGGTTGATGTCAGGCGGGCGCAGGACGCCGTCATTGCCGGCAGAGGAAAACGGCAGCCGCCCCAGCAGAAGAAGGACGGAGCAAAGGGAAGCCGTCGATCCTTCTTCGTCCCGCCCTCGTTCGGCGGCTGTGATTTGGCCCGAGCACTTCGTCGAGGCGGTCGCTCGCCGGCTCGCCGCCGATGCAGCCCGACCAGGTCGCCGCCTCGACGCCGCCCCAGCCATCGTCCCACTCTTCCAGGTCTGCTCGGCATGGCGGTGCTTCTCCCGGTCAGAAGTCCTATGGCAAGAGCTCACCCGGGTGGTGTGGCCTCTGCGCCACATCCTCGCCCGCCGCCGCCCTTCGTGGCGGGAAGAGTTCATCTCCCTCCACCGGACTGCCGCCAACTTCCGTTCCGGCGGCTTCATGCACTCCCAAATTCGTGACCCCCAAATCCGCCCCGCGCATCTCGTCTGCCGACGCCTCGCCCTCTCCGACAGGCACCTGGCGGCCGGCTTCAGCGATGGCTCGGTCCGCTTGTACCACCTCCCCACTGTATCCCTCGTCGCCCTCCACGGTCTTGGAAACCGTGACCGCCTGGGCCAGTTCTCCTCCTCCATCTCTGGCATAATTCTCCTGGGGCGGCGGCTGGTGTTCGCGTCGCAGGACGGCGACATCGGCGTCGTGGAGGACGGCTTTGCCGGCGCGGCGGCCCGGCGAGTGCGTGCTGGCCACCCGGTCGAGGATGGCGTGCTGGTGGATTTTACCGGAGATGAGAGGTGGTGGATGGGGATCTTCGCGGGTGCGCCGGGGTGGTCGTGGCGAGTGTGGGATGCGGAGACGGAGCGGGAAGTTCACGCAGGTGGATCGCTCACCGACAGCTTCTCGGTGGCTGGGTGGCGCATGCTGGCTGACATAAGCGGACCGTCGGTGGCGCGGGTGGGTACGGGGGGGCTGGGAGCGGTGGTCGGGTGCACGAGTGAGCGGGCCCAGGCCGTGAGGATTGAGGGAGGGCGCGTGCTGGAGGTGACTGCGGAGATGGAGCTCGGGGAGGCGGCGGTGGATGGGCTCGGTGCTAGCGATGGGAGGGCTGTGGTGGTTGAGGCGGGGGGGCGTGTGGCGGTGGTGAGGGACGCGATGACGCTGGAGGAGGTCTGTAGGTTTGGGGTGCCAAGAGGTCGGGGAAGAGGTCCGGGACCCGCGATAATTGGGTGCATGAACTCTGGGTTCGTCTTTATGTGGGTCGGGGGAGGAGGTGGCAGGGTTTGGGATTCCACCACTGGAGAGTTCTTGTACGGGTTCATGCAGAGGGTTGGGGAGGTTAGAGCGGTTGCTGCTAATGATCGCTATGTGGCCGCTTGGTCCGACGACACTGGCCTCAACTTGTGGGATTTTGGGCACTGACTCATTTGTTACCGTTGCGCTTGCATTGTGCATCTTCAATTTGCTCAAGTTCAAATTTTATTTATTTGTTTATTTATTTATTTTTTAATGATTATGGTTTTGTGAGTTATTTTATTAAATTAAATTGCTATGTATGATTTGTTAAGGAATCATGTAGATACTCGTTGTCTTAAGGTATATTAGTTCTAGTGGGTTGACAGTCCAAAAACTAGCCGAAGGCCTCTTAGTTCTTGAAACTTGCATTTCCTGAGTTTTCAATGATTTCTATATGCT

Network for GWHGAAEX004897

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	SAP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.090
SRP064423	SRR2545915	Juvenile tuber	0.200
SRP108465	SRR5643513	five period of Gastrodia elata	0.280
	SRR5643514	five period of Gastrodia elata	0.350
	SRR5643515	five period of Gastrodia elata	0.520
	SRR5643524	five period of Gastrodia elata	0.350
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.090
	SRR5643662	five period of Gastrodia elata	0.040
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.460
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.090
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.590
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.660
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.470
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.470
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.02
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	0.04