Detail information of GWHGAAEX004907/evm.TU.scaffold_156.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374288387|ref|YP_005035472.1|3.00E-18putative inorganic pyrophosphatase [Bacteriovorax marinus SJ]
KOGKOG16265.00E-145Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38
nrgi|747081471|ref|XP_011088008.1|2.03E-153PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic-like [Sesamum indicum]
Swissprottr|Q9LXC9|IPYR1_ARATH2.00E-145Soluble inorganic pyrophosphatase 1, chloroplastic (Precursor)
trEMBLtr|A9PEN9|A9PEN9_POPTR2.00E-153Uncharacterized protein {ECO:0000313|EMBL:EEE83608.1}
TAIRAT5G096505.00E-145pyrophosphorylase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016010505801062931+
Transcript Sequence

Network for GWHGAAEX004907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00719.18Pyrophosphatase1122892.00E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01507ppa Oxidative phosphorylation map00190

Gene Ontology

GO term OntologyName
GO:0006796Biological Processphosphate-containing compound metabolic process
GO:0000287Molecular Functionmagnesium ion binding
GO:0004427Molecular Functioninorganic diphosphatase activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.010
SRR2545915Juvenile tuber69.980
SRP108465SRR5643513five period of Gastrodia elata63.420
SRR5643514five period of Gastrodia elata69.020
SRR5643515five period of Gastrodia elata63.390
SRR5643524five period of Gastrodia elata61.580
SRR5643525five period of Gastrodia elata37.490
SRR5643528five period of Gastrodia elata34.320
SRR5643658five period of Gastrodia elata33.610
SRR5643659five period of Gastrodia elata56.010
SRR5643660five period of Gastrodia elata54.500
SRR5643661five period of Gastrodia elata59.290
SRR5643662five period of Gastrodia elata61.280
SRR5643663five period of Gastrodia elata62.380
SRR5643664five period of Gastrodia elata60.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_169.400
SRR6049655Rhizomagastrodiae_C368-T10_good_164.110
SRR6049656Rhizomagastrodiae_C368-T07_good_173.010
SRR6049657Rhizomagastrodiae_C368-T07_good_172.390
SRR6049658Rhizomagastrodiae_C368-T04_good_153.200
SRR6049659Rhizomagastrodiae_C368-T04_good_151.990
SRR6049660Rhizomagastrodiae_C368-T01_good_165.630
SRR6049661Rhizomagastrodiae_C368-T04_good_162.000
SRR6049662Rhizomagastrodiae_C368-T01_good_169.390
SRR6049663Rhizomagastrodiae_C368-T01_good_168.820
SRR6049664Rhizomagastrodiae_C368-T10_good_178.520
SRR6049665Rhizomagastrodiae_C368-T10_good_178.520
SRP279888GastroGastrodia elata tuber 56.76
JuvenJuvenile tuber60.83
Mother_GastroMother tuber of Gastrodia elata 18.53
Mother_JuvenMother tuber of Juvenile 22.64