Detail information of GWHGAAEX004908/evm.TU.scaffold_156.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694407667|ref|XP_009378561.1|7.71E-35PREDICTED: transcription factor bHLH18-like [Pyrus x bretschneideri]
Swissprottr|Q9T072|BH025_ARATH2.00E-26Transcription factor bHLH25
trEMBLtr|A0A059ASU8|A0A059ASU8_EUCGR2.00E-33Uncharacterized protein {ECO:0000313|EMBL:KCW56854.1}
TAIRAT4G378502.00E-25basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016010761041100239+
Transcript Sequence

Network for GWHGAAEX004908

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH951392.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.610
SRR2545915Juvenile tuber1.640
SRP108465SRR5643513five period of Gastrodia elata1.140
SRR5643514five period of Gastrodia elata0.340
SRR5643515five period of Gastrodia elata0.850
SRR5643524five period of Gastrodia elata0.950
SRR5643525five period of Gastrodia elata2.400
SRR5643528five period of Gastrodia elata1.620
SRR5643658five period of Gastrodia elata2.380
SRR5643659five period of Gastrodia elata0.120
SRR5643660five period of Gastrodia elata0.070
SRR5643661five period of Gastrodia elata0.350
SRR5643662five period of Gastrodia elata0.070
SRR5643663five period of Gastrodia elata0.100
SRR5643664five period of Gastrodia elata0.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.960
SRR6049655Rhizomagastrodiae_C368-T10_good_12.550
SRR6049656Rhizomagastrodiae_C368-T07_good_14.610
SRR6049657Rhizomagastrodiae_C368-T07_good_13.750
SRR6049658Rhizomagastrodiae_C368-T04_good_111.770
SRR6049659Rhizomagastrodiae_C368-T04_good_114.570
SRR6049660Rhizomagastrodiae_C368-T01_good_18.790
SRR6049661Rhizomagastrodiae_C368-T04_good_111.780
SRR6049662Rhizomagastrodiae_C368-T01_good_111.610
SRR6049663Rhizomagastrodiae_C368-T01_good_117.460
SRR6049664Rhizomagastrodiae_C368-T10_good_18.760
SRR6049665Rhizomagastrodiae_C368-T10_good_18.760
SRP279888GastroGastrodia elata tuber 0.62
JuvenJuvenile tuber0.28
Mother_GastroMother tuber of Gastrodia elata 26.21
Mother_JuvenMother tuber of Juvenile 4.10