Detail information of GWHGAAEX004914/evm.TU.scaffold_156.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|5.00E-31serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|743846794|ref|XP_010938933.1|0PREDICTED: calcium-dependent protein kinase 1-like [Elaeis guineensis]
Swissprottr|Q06850|CDPK1_ARATH0Calcium-dependent protein kinase 1
trEMBLtr|B2KL91|B2KL91_PHAAB0Calcium-dependent protein kinase 1 {ECO:0000313|EMBL:ABU45516.1}
TAIRAT5G048700calcium dependent protein kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016013961341402269-
Transcript Sequence

Network for GWHGAAEX004914

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1283862.20E-72
PF13499.5EF-hand_74344949.90E-11
PF13499.5EF-hand_75045651.80E-11
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.170
SRR2545915Juvenile tuber4.430
SRP108465SRR5643513five period of Gastrodia elata12.310
SRR5643514five period of Gastrodia elata15.420
SRR5643515five period of Gastrodia elata12.060
SRR5643524five period of Gastrodia elata13.530
SRR5643525five period of Gastrodia elata8.320
SRR5643528five period of Gastrodia elata9.640
SRR5643658five period of Gastrodia elata9.480
SRR5643659five period of Gastrodia elata5.620
SRR5643660five period of Gastrodia elata4.400
SRR5643661five period of Gastrodia elata5.540
SRR5643662five period of Gastrodia elata5.510
SRR5643663five period of Gastrodia elata5.150
SRR5643664five period of Gastrodia elata4.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.680
SRR6049655Rhizomagastrodiae_C368-T10_good_118.070
SRR6049656Rhizomagastrodiae_C368-T07_good_118.370
SRR6049657Rhizomagastrodiae_C368-T07_good_18.050
SRR6049658Rhizomagastrodiae_C368-T04_good_112.020
SRR6049659Rhizomagastrodiae_C368-T04_good_112.380
SRR6049660Rhizomagastrodiae_C368-T01_good_17.610
SRR6049661Rhizomagastrodiae_C368-T04_good_18.750
SRR6049662Rhizomagastrodiae_C368-T01_good_117.000
SRR6049663Rhizomagastrodiae_C368-T01_good_119.140
SRR6049664Rhizomagastrodiae_C368-T10_good_128.850
SRR6049665Rhizomagastrodiae_C368-T10_good_128.850
SRP279888GastroGastrodia elata tuber 3.19
JuvenJuvenile tuber6.61
Mother_GastroMother tuber of Gastrodia elata 7.79
Mother_JuvenMother tuber of Juvenile 7.49