Detail information of GWHGAAEX004919/evm.TU.scaffold_156.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720099745|ref|XP_010248033.1|4.55E-22PREDICTED: uncharacterized protein LOC104590955 [Nelumbo nucifera]
trEMBLtr|U5FWB3|U5FWB3_POPTR1.00E-21Uncharacterized protein {ECO:0000313|EMBL:ERP55400.1} (Fragment)
TAIRAT2G345805.00E-17Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016015763731577093+
Transcript Sequence

Network for GWHGAAEX004919

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.620
SRR2545915Juvenile tuber12.800
SRP108465SRR5643513five period of Gastrodia elata34.830
SRR5643514five period of Gastrodia elata43.770
SRR5643515five period of Gastrodia elata38.180
SRR5643524five period of Gastrodia elata39.410
SRR5643525five period of Gastrodia elata35.730
SRR5643528five period of Gastrodia elata30.480
SRR5643658five period of Gastrodia elata33.500
SRR5643659five period of Gastrodia elata28.510
SRR5643660five period of Gastrodia elata18.760
SRR5643661five period of Gastrodia elata28.660
SRR5643662five period of Gastrodia elata20.790
SRR5643663five period of Gastrodia elata20.550
SRR5643664five period of Gastrodia elata28.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.950
SRR6049655Rhizomagastrodiae_C368-T10_good_183.220
SRR6049656Rhizomagastrodiae_C368-T07_good_136.880
SRR6049657Rhizomagastrodiae_C368-T07_good_125.040
SRR6049658Rhizomagastrodiae_C368-T04_good_127.520
SRR6049659Rhizomagastrodiae_C368-T04_good_122.040
SRR6049660Rhizomagastrodiae_C368-T01_good_123.220
SRR6049661Rhizomagastrodiae_C368-T04_good_125.410
SRR6049662Rhizomagastrodiae_C368-T01_good_138.180
SRR6049663Rhizomagastrodiae_C368-T01_good_135.280
SRR6049664Rhizomagastrodiae_C368-T10_good_155.200
SRR6049665Rhizomagastrodiae_C368-T10_good_155.200
SRP279888GastroGastrodia elata tuber 27.51
JuvenJuvenile tuber17.02
Mother_GastroMother tuber of Gastrodia elata 30.61
Mother_JuvenMother tuber of Juvenile 16.39