Detail information of GWHGAAEX004926/evm.TU.scaffold_156.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218961440|ref|YP_001741215.1|6.00E-166putative ornithine/acetylornithine/succinyldiaminopimelate aminotransferase (ornithine/acetylornithine/succinyldiaminopimelate transaminase) (dapC-like) [Candidatus Cloacimonas acidaminovorans str. Evry]
KOGKOG14020Ornithine aminotransferase
nrgi|743761189|ref|XP_010940988.1|0PREDICTED: ornithine aminotransferase, mitochondrial isoform X1 [Elaeis guineensis]
Swissprottr|Q10G56|OAT_ORYSJ0Ornithine aminotransferase, mitochondrial (Precursor)
trEMBLtr|B8ANL7|B8ANL7_ORYSI0Putative uncharacterized protein {ECO:0000313|EMBL:EEC75822.1}
TAIRAT5G461800ornithine-delta-aminotransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016018364371864627+
Transcript Sequence

Network for GWHGAAEX004926

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00202.20Aminotran_3474394.60E-116
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00819rocD, OAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Arginine and proline metabolismmap00330

Gene Ontology

GO term OntologyName
GO:0030170Molecular Functionpyridoxal phosphate binding
GO:0004587Molecular Functionornithine-oxo-acid transaminase activity
GO:0003824Molecular Functioncatalytic activity
GO:0008483Molecular Functiontransaminase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms136.370
SRR2545915Juvenile tuber108.790
SRP108465SRR5643513five period of Gastrodia elata120.590
SRR5643514five period of Gastrodia elata90.090
SRR5643515five period of Gastrodia elata86.760
SRR5643524five period of Gastrodia elata77.160
SRR5643525five period of Gastrodia elata123.110
SRR5643528five period of Gastrodia elata99.560
SRR5643658five period of Gastrodia elata139.600
SRR5643659five period of Gastrodia elata64.360
SRR5643660five period of Gastrodia elata69.230
SRR5643661five period of Gastrodia elata70.530
SRR5643662five period of Gastrodia elata71.390
SRR5643663five period of Gastrodia elata65.370
SRR5643664five period of Gastrodia elata75.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1144.580
SRR6049655Rhizomagastrodiae_C368-T10_good_1189.550
SRR6049656Rhizomagastrodiae_C368-T07_good_1140.590
SRR6049657Rhizomagastrodiae_C368-T07_good_1217.850
SRR6049658Rhizomagastrodiae_C368-T04_good_1147.990
SRR6049659Rhizomagastrodiae_C368-T04_good_1168.140
SRR6049660Rhizomagastrodiae_C368-T01_good_1166.840
SRR6049661Rhizomagastrodiae_C368-T04_good_1170.330
SRR6049662Rhizomagastrodiae_C368-T01_good_179.060
SRR6049663Rhizomagastrodiae_C368-T01_good_171.190
SRR6049664Rhizomagastrodiae_C368-T10_good_1101.570
SRR6049665Rhizomagastrodiae_C368-T10_good_1101.570
SRP279888GastroGastrodia elata tuber 64.68
JuvenJuvenile tuber96.20
Mother_GastroMother tuber of Gastrodia elata 30.27
Mother_JuvenMother tuber of Juvenile 58.42